RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 USP45Q70EL2 814 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 NKAPQ8N5F7 415 aaKnown RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 ERVK-6Q9BXR3 956 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 NUF2Q9BZD4 464 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 BRD9Q9H8M2 597 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 KIF26AQ9ULI4 1882 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ANKRD12Q6UB98 2062 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 AGAP14A8MT82 685 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 A8MUI8 341 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 UBFD1O14562 309 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TPBGLP0DKB5 382 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 RPS3P23396 243 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 SPAM1P38567 509 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ATP6V0D1P61421 351 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 MESP2Q0VG99 397 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TSNQ15631 228 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 SH2D4BQ5SQS7 431 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GRAMD4Q6IC98 578 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GDPD4Q6W3E5 623 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 FBXO27Q8NI29 283 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 EXT2Q93063 718 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■■■■■ 43.2
ATG4B-225ENST00000494465 RAB3IPQ96QF0 476 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 CADM1Q9BY67 442 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TCF7L2Q9NQB0 619 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 CDH22Q9UJ99 828 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 TRMT6Q9UJA5 497 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 WASF2Q9Y6W5 498 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GOLGA8QA0A0J9YX86 632 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GOLGA8OA6NCC3 632 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GOLGA8NF8WBI6 632 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 CDC7O00311 574 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 SMIM24O75264 130 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ARSAP15289 507 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ITGALP20701 1170 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ACRV1P26436 265 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 EPHA3P29320 983 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 CPA2P48052 419 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 DGKGP49619 791 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 GAB4Q2WGN9 574 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 METTL21CQ5VZV1 264 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 RFLNAQ6ZTI6 216 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 PARP9Q8IXQ6 854 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 PTGR2Q8N8N7 351 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 STAG3L4Q8TBR4 150 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 NAT14Q8WUY8 206 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 EEF1AKMT1Q8WVE0 214 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 FGF13Q92913 245 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 FUBP1Q96AE4 644 aaKnown RBP16.4■□□□□ 0.22
ATG4B-225ENST00000494465 PPP1R36Q96LQ0 422 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 KLHL32Q96NJ5 620 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 PCDHB1Q9Y5F3 818 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 PRSS21Q9Y6M0 314 aa16.4■□□□□ 0.22
ATG4B-225ENST00000494465 OTOL1A6NHN0 477 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-225ENST00000494465 E9PBE3 544 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 KLHL41O60662 606 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 CHRM3P20309 590 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 LRRC73Q5JTD7 316 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 CUZD1Q86UP6 607 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 CPNE9Q8IYJ1 553 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 ZFYVE19Q96K21 471 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 LMAN2LQ9H0V9 348 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 MTG2Q9H4K7 406 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 B4GALT6Q9UBX8 382 aa16.39■□□□□ 0.21
ATG4B-225ENST00000494465 LRRC14BA6NHZ5 514 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 NEMP1O14524 444 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 SIX3O95343 332 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 C1SP09871 688 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 ZNF7P17097 686 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 PTPN5P54829 565 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 RIPK1Q13546 671 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 PDCD2Q16342 344 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 PFKFB4Q16877 469 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 LSM12Q3MHD2 195 aaKnown RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 RBFAQ8N0V3 343 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 BPIFB1Q8TDL5 484 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 SMARCD2Q92925 531 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 MAELQ96JY0 434 aaKnown RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 HEPHQ9BQS7 1158 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 TRMOQ9BU70 441 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 GTSE1Q9NYZ3 720 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 DHRS7Q9Y394 339 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 COL4A3Q01955 1670 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 A0A1W2PQ67 120 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 NPEPPSL1A6NEC2 478 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 E5RI56 91 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 GSC2O15499 205 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 TULP3O75386 442 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 ECI2O75521 394 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 SUPT7LO94864 414 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms