RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TOP3BO95985 862 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 AGTP01019 485 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 IVLP07476 585 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 BPIP17213 487 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 CKMT2P17540 419 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 KELP23276 732 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 HTR1BP28222 390 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 STIP1P31948 543 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 CXCR5P32302 372 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 HMGCLP35914 325 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 GPR1P46091 355 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 CCNG2Q16589 344 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 PARP6Q2NL67 630 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 P3H1Q32P28 736 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 HID1Q8IV36 788 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 SLC35F6Q8N357 371 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 GLIS1Q8NBF1 620 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ATL2Q8NHH9 583 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 CCHCR1Q8TD31 782 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 LMX1AQ8TE12 382 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 C1orf54Q8WWF1 131 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ADAMTS14Q8WXS8 1223 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ANP32BQ92688 251 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 SRPK1Q96SB4 655 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 FERMT1Q9BQL6 677 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 RIOK2Q9BVS4 552 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 BOCQ9BWV1 1114 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 CDH19Q9H159 772 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 TRABDQ9H4I3 376 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 MRPL40Q9NQ50 206 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 PHPT1Q9NRX4 125 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 TRMT1Q9NXH9 659 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 PKD2L2Q9NZM6 624 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 HACD3Q9P035 362 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 IL17CQ9P0M4 197 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 SPASTQ9UBP0 616 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 AAR2Q9Y312 384 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 OAS3Q9Y6K5 1087 aaKnown RBP8.71□□□□□ -1.02
ITGB1-217ENST00000494395 RP1P56715 2156 aa8.71□□□□□ -1.02
ITGB1-217ENST00000494395 FAM221BA6H8Z2 402 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PDE2AO00408 941 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FFAR2O15552 330 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ZSCAN12O43309 604 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FGGP02679 453 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ATP1A1P05023 1023 aaKnown RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PYGLP06737 847 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 CKMT1AP12532 417 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ACP1P24666 158 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 BLKP51451 505 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 DNAJC3Q13217 504 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 C1orf61Q13536 156 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 DEFB133Q30KQ1 61 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF569Q5MCW4 686 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 LVRNQ6Q4G3 990 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ARHGEF18Q6ZSZ5 1173 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 GLT6D1Q7Z4J2 308 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 TRIM74Q86UV6 250 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 NRROSQ86YC3 692 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 SDR16C5Q8N3Y7 309 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FSTL5Q8N475 847 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 SLC25A41Q8N5S1 370 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PNPLA1Q8N8W4 532 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PRELID2Q8N945 189 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 DTX3LQ8TDB6 740 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 GPBAR1Q8TDU6 330 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 HIC2Q96JB3 615 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 APOLD1Q96LR9 279 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PPP1R2P1Q96PQ5 205 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PLEKHG4BQ96PX9 1271 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 TBL1YQ9BQ87 522 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 APOL2Q9BQE5 337 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 GPR63Q9BZJ6 419 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 SLC13A1Q9BZW2 595 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 TMEM168Q9H0V1 697 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FAM83DQ9H4H8 585 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 ATP13A2Q9NQ11 1180 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 TMPRSS11EQ9UL52 423 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 APOBEC2Q9Y235 224 aaKnown RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 DRG1Q9Y295 367 aaKnown RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PCDHGA1Q9Y5H4 931 aa8.7□□□□□ -1.02
ITGB1-217ENST00000494395 PCYT1BQ9Y5K3 369 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-217ENST00000494395 FANCGO15287 622 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 INPP4BO15327 924 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 YY2O15391 372 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-217ENST00000494395 CEP104O60308 925 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 DNAJC6O75061 913 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 USP12O75317 370 aa8.69□□□□□ -1.02
ITGB1-217ENST00000494395 TRIM16O95361 564 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms