RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TBC1D3Q8IZP1 549 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 HECAQ9UBI9 543 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TCAF1Q9Y4C2 921 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 GPR25O00155 361 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 DBTP11182 482 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 HNF4AP41235 474 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 POLR2JP52435 117 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 RHAGQ02094 409 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 ZNF846Q147U1 533 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 NDUFA9Q16795 377 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 FBXO22Q8NEZ5 403 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 HNRNPABQ99729 332 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 NTPCRQ9BSD7 190 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TDRD1Q9BXT4 1180 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 DNAJC11Q9NVH1 559 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 E9PAM4 449 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 OGNP20774 298 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ACAP2Q15057 778 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ERICH5Q6P6B1 374 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 CXXC5Q7LFL8 322 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 KIFC1Q9BW19 673 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 TMEM88BA6NKF7 163 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 IDSP22304 550 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 L1CAMP32004 1257 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 CDK9P50750 372 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ATP13A5Q4VNC0 1218 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ANKS1BQ7Z6G8 1248 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 STYXQ8WUJ0 223 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ZDHHC4Q9NPG8 344 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 EIF2B3Q9NR50 452 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 LRATO95237 230 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 SPAM1P38567 509 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ZSWIM7Q19AV6 140 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 SLAIN1Q8ND83 568 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 OR10G6Q8NH81 332 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 TWIST2Q8WVJ9 160 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 NFAT5O94916 1531 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 UGT2B11O75310 529 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 MYL9P24844 172 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 SLC26A3P40879 764 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 GNPDA1P46926 289 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 PTGES3Q15185 160 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 CEP68Q76N32 757 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 OR4K2Q8NGD2 314 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 AP3S1Q92572 193 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 NDRG1Q92597 394 aaKnown RBP19.05■□□□□ 0.64
COL27A1-207ENST00000494090 SLC28A3Q9HAS3 691 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ITGB1BP2Q9UKP3 347 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 ERVW-1Q9UQF0 538 aa19.05■□□□□ 0.64
COL27A1-207ENST00000494090 CACNG1Q06432 222 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 LAPTM5Q13571 262 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 CPTPQ5TA50 214 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PLPP4Q5VZY2 271 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 GLYATQ6IB77 296 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 SPPL2CQ8IUH8 684 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 OR4A15Q8NGL6 344 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 SLC28A2O43868 658 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ETS2P15036 469 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 CRTC3Q6UUV7 619 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 FAM92BQ6ZTR7 304 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 GNEQ9Y223 722 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 UBE2QL1A1L167 161 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 TCEA3O75764 348 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 CORO1AP31146 461 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 TRIM32Q13049 653 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 POC5Q8NA72 575 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 GPR152Q8TDT2 470 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 DQX1Q8TE96 717 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ABCB10Q9NRK6 738 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 LRIG2O94898 1065 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 C1RP00736 705 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 BUD31P41223 144 aaPredicted RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PNLIPRP1P54315 467 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 MANFP55145 182 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 TRAP1Q12931 704 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PPIGQ13427 754 aaKnown RBP eCLIP19.04■□□□□ 0.641e-20■■■■□ 19.3
COL27A1-207ENST00000494090 PERM1Q5SV97 790 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 VWA5B1Q5TIE3 1220 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 FSTL4Q6MZW2 842 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ZDHHC24Q6UX98 284 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PEX5LQ8IYB4 626 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 SMG7Q92540 1137 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 LPGAT1Q92604 370 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 SLC25A51Q9H1U9 297 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PNPLA8Q9NP80 782 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ZDHHC18Q9NUE0 388 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 IMP3Q9NV31 184 aaKnown RBP19.04■□□□□ 0.64
COL27A1-207ENST00000494090 KCNU1A8MYU2 1149 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 MCIDASD6RGH6 385 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 H3BM21 787 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 TACR2P21452 398 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ATAT1Q5SQI0 421 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 LEMD2Q8NC56 503 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ERLEC1Q96DZ1 483 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 MFSD3Q96ES6 412 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 ACBD6Q9BR61 282 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 PIGUQ9H490 435 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 SH3GLB1Q9Y371 365 aa19.04■□□□□ 0.64
COL27A1-207ENST00000494090 MATN3O15232 486 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms