RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 HERPUD2Q9BSE4 406 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 SPATA16Q9BXB7 569 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 RBSNQ9H1K0 784 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 OR2AG1Q9H205 316 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 FOXJ2Q9P0K8 574 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 TBC1D29Q9UFV1 150 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 TMPRSS11EQ9UL52 423 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 KCNK6Q9Y257 313 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 ADGRG1Q9Y653 693 aa9.66□□□□□ -0.86
UFD1-210ENST00000494054 PRAMEF33A0A0G2JMD5 474 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 LOC285095A0A1B0GVY8 99 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 A6NCN8 305 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 SOWAHDA6NJG2 315 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 EIF4E1BA6NMX2 242 aaKnown RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 K7ENP7 123 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 GRID2O43424 1007 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 SNX2O60749 519 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 PRAMEF10O60809 474 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 ZRANB2O95218 330 aaKnown RBP eCLIP9.65□□□□□ -0.86
UFD1-210ENST00000494054 SLC25A14O95258 325 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 CHRNA4P43681 627 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 FASLGP48023 281 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 LIMK2P53671 638 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 WNT3AP56704 352 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 SQSTM1Q13501 440 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 PEX6Q13608 980 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 CLPPQ16740 277 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 KHDC1Q4VXA5 237 aaKnown RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 TFDP3Q5H9I0 405 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 ZNF569Q5MCW4 686 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 C11orf63Q6NUN7 778 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 IYDQ6PHW0 289 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 INO80CQ6PI98 192 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 ADGRG6Q86SQ4 1221 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 ZC3H18Q86VM9 953 aaKnown RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 RCOR2Q8IZ40 523 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 ZNF567Q8N184 647 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 TRAM1L1Q8N609 369 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 P3H4Q92791 437 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 PMEPA1Q969W9 287 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 TMEM159Q96B96 161 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 OXNAD1Q96HP4 312 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 CCDC74BQ96LY2 380 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 CMKLR1Q99788 373 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 GPR63Q9BZJ6 419 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 CARD9Q9H257 536 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 C10orf88Q9H8K7 445 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 RMI1Q9H9A7 625 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 TRIM39Q9HCM9 518 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 BPIFA1Q9NP55 256 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 KCNK4Q9NYG8 393 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 NFKBIL1Q9UBC1 381 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 SLC23A2Q9UGH3 650 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 ACSL6Q9UKU0 697 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 REXO2Q9Y3B8 237 aaKnown RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
UFD1-210ENST00000494054 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.86
UFD1-210ENST00000494054 TK2O00142 265 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 HGSO14964 777 aaPredicted RBP9.64□□□□□ -0.87
UFD1-210ENST00000494054 ZW10O43264 779 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 MTX2O75431 263 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 THRAP10827 490 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 FGF3P11487 239 aaPredicted RBP9.64□□□□□ -0.87
UFD1-210ENST00000494054 CA5AP35218 305 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 ARSDP51689 593 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 DCDC1P59894 354 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 NFATC2Q13469 925 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 SPA17Q15506 151 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 SIRPB2Q5JXA9 342 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 KIAA1614Q5VZ46 1190 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 CCDC70Q6NSX1 233 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 TMEM71Q6P5X7 295 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 CCDC81Q6ZN84 652 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 BBS12Q6ZW61 710 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 PID1Q7Z2X4 250 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 CCDC50Q8IVM0 306 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 TTC30BQ8N4P2 665 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 SLC25A41Q8N5S1 370 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 LSM14AQ8ND56 463 aaKnown RBP9.64□□□□□ -0.87
UFD1-210ENST00000494054 OR4D9Q8NGE8 314 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 HTR3CQ8WXA8 447 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 TTC9Q92623 222 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 GLYATL1Q969I3 302 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 QKIQ96PU8 341 aaKnown RBP eCLIP9.64□□□□□ -0.87
UFD1-210ENST00000494054 FCRL5Q96RD9 977 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 CCNL2Q96S94 520 aaPredicted RBP9.64□□□□□ -0.87
UFD1-210ENST00000494054 SLC38A3Q99624 504 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 ANP32EQ9BTT0 268 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 ZSCAN5AQ9BUG6 496 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 SARS2Q9NP81 518 aaKnown RBP9.64□□□□□ -0.87
UFD1-210ENST00000494054 PRDM8Q9NQV8 689 aa9.64□□□□□ -0.87
UFD1-210ENST00000494054 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms