RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IQCKQ8N0W5 287 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 SLC44A1Q8WWI5 657 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 GLYATL1Q969I3 302 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 ULK4Q96C45 1275 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 SGSM3Q96HU1 749 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 SLCO1B1Q9Y6L6 691 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 TRBV5-4A0A0C4DH59 114 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 HAUS5O94927 633 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 SLC25A14O95258 325 aaPredicted RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 S1PR4O95977 384 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 AKT2P31751 481 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 GP5P40197 560 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 TTPAP49638 278 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 EIF3BP55884 814 aaKnown RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 NAB1Q13506 487 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 TMED2Q15363 201 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 ANGPT1Q15389 498 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 KRT71Q3SY84 523 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 KHDC1Q4VXA5 237 aaKnown RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 SLC36A4Q6YBV0 504 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 DET1Q7L5Y6 550 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 SLC26A11Q86WA9 606 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 PHYKPLQ8IUZ5 450 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 SLC41A1Q8IVJ1 513 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 LMNTD2Q8IXW0 634 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 DCAKDQ8WVC6 231 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 SERAC1Q96JX3 654 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 NDNQ99608 321 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 CPNE1Q99829 537 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 CENPHQ9H3R5 247 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 WDR26Q9H7D7 661 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 SMOXQ9NWM0 555 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 NSMCE4AQ9NXX6 385 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 FBXO4Q9UKT5 387 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 CCDC163A0A0D9SF12 145 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 POM121BA6NF01 834 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 RASGRF2O14827 1237 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 AHSGP02765 367 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 MAOBP27338 520 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 CD151P48509 253 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 BTN2A2Q8WVV5 523 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 COPS8Q99627 209 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 LGR4Q9BXB1 951 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 MIR1-1HGQ9H1L0 117 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 KCTD5Q9NXV2 234 aa19.2■□□□□ 0.66
USP39-218ENST00000493829 PSMC3IPQ9P2W1 217 aaPredicted RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 CNOT6Q9ULM6 557 aaKnown RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 OAS3Q9Y6K5 1087 aaKnown RBP19.2■□□□□ 0.66
USP39-218ENST00000493829 C10orf142B7Z368 130 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 FPGTO14772 594 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 SAT1P21673 171 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 FMO4P31512 558 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 CDK3Q00526 305 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 ADAMTSL4Q6UY14 1074 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 GCNT7Q6ZNI0 430 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 KIAA0408Q6ZU52 694 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 GPATCH11Q8N954 259 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 ASB12Q8WXK4 309 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 LPGAT1Q92604 370 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 FAM136AQ96C01 138 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 HIC2Q96JB3 615 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 SLC6A18Q96N87 628 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 VPS35Q96QK1 796 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 RBBP8Q99708 897 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 DHRS4Q9BTZ2 278 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 ZDHHC3Q9NYG2 299 aa19.19■□□□□ 0.66
USP39-218ENST00000493829 EIF2B4Q9UI10 523 aaKnown RBP19.19■□□□□ 0.66
USP39-218ENST00000493829 CEP192Q8TEP8 1941 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 AGAP14A8MT82 685 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 METTL12A8MUP2 240 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 SP9P0CG40 484 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 MSH3P20585 1137 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 PTGER3P43115 390 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 LEPRP48357 1165 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 B4GALNT1Q00973 533 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 RBM20Q5T481 1227 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 RNF187Q5TA31 235 aaPredicted RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 LRIG3Q6UXM1 1119 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 CERS6Q6ZMG9 384 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 ZC3HC1Q86WB0 502 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 CLDN19Q8N6F1 224 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 DENND6BQ8NEG7 585 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 DDHD1Q8NEL9 900 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 ACVR1CQ8NER5 493 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 CADM4Q8NFZ8 388 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 GAB3Q8WWW8 586 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 FUBP1Q96AE4 644 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 DCUN1D1Q96GG9 259 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 VPS39Q96JC1 886 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 TTC1Q99614 292 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 AASDHPPTQ9NRN7 309 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 INTS10Q9NVR2 710 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 SLC24A2Q9UI40 661 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 TMEM98Q9Y2Y6 226 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 PRSS21Q9Y6M0 314 aa19.18■□□□□ 0.66
USP39-218ENST00000493829 ATXN2Q99700 1313 aaKnown RBP19.18■□□□□ 0.66
USP39-218ENST00000493829 A0A1W2PPC4 97 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 FOXO6A8MYZ6 492 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PFDN6O15212 129 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 ASMTLO95671 621 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms