RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SLCO2A1Q92959 643 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TCEAL3Q969E4 200 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GJA10Q969M2 543 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CNDP2Q96KP4 475 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GPR88Q9GZN0 384 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CLEC4MQ9H2X3 399 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GPRC5CQ9NQ84 441 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SMPD3Q9NY59 655 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TINAGQ9UJW2 476 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GMPPBQ9Y5P6 360 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SYNJ2BP-COX16A0A087WUM0 186 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 NT5C1B-RDH14C9J2C7 533 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 LAD1O00515 517 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PSIP1O75475 530 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SLC22A5O76082 557 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 BPGMP07738 259 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PGDP52209 483 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 KCNK10P57789 538 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 LTB4RQ15722 352 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 XKRXQ6PP77 449 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 KLHL17Q6TDP4 642 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TFAP2DQ7Z6R9 452 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 IFNEQ86WN2 208 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 DHFR2Q86XF0 187 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SLC22A15Q8IZD6 547 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 OR52N1Q8NH53 320 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 MCOLN3Q8TDD5 553 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 DCAKDQ8WVC6 231 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 MYDGFQ969H8 173 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PAWRQ96IZ0 340 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 APBA2Q99767 749 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TEX12Q9BXU0 123 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ILKAPQ9H0C8 392 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 RIBC2Q9H4K1 309 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 FBXO8Q9NRD0 319 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PIH1D1Q9NWS0 290 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GTF2IRD1Q9UHL9 959 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TSR3Q9UJK0 312 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CNTNAP2Q9UHC6 1331 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GATCO43716 136 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ZBTB14O43829 449 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 IL18RAPO95256 599 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 HOXD4P09016 255 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 RD3LP0DJH9 198 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 HOXB3P14651 431 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 HPGDP15428 266 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SLC7A1P30825 629 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CSTF2P33240 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GRK3P35626 688 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 HNF4AP41235 474 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 STARP49675 285 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PSME3P61289 254 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 RHDQ02161 417 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 INPP5AQ14642 412 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 AANATQ16613 207 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF404Q494X3 552 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PAN3Q58A45 887 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 C17orf107Q6ZR85 190 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CREB3L2Q70SY1 520 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CHMP1BQ7LBR1 199 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 MPP5Q8N3R9 675 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 YIPF7Q8N8F6 280 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 KDM1BQ8NB78 822 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GLIS1Q8NBF1 620 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 MTMR14Q8NCE2 650 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PIK3C3Q8NEB9 887 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 FBXO30Q8TB52 745 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SLC7A6Q92536 515 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ASB2Q96Q27 587 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 FAM213AQ9BRX8 229 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ZC3H12CQ9C0D7 883 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PRMT8Q9NR22 394 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ASH2LQ9UBL3 628 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ATXN7L1Q9ULK2 861 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TMX2Q9Y320 296 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 GRIP1Q9Y3R0 1128 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PCDHGB1Q9Y5G3 927 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 PNMA8CA0A1B0GUJ8 204 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ATP6AP2A0A1C7CYW4 349 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SMLR1H3BR10 107 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC30A4O14863 429 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CAPN5O15484 640 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 KCNN4O15554 427 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CPNE6O95741 557 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CPB1P15086 417 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 PSMA4P25789 261 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 HOXA1P49639 335 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CYP2J2P51589 502 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 NUBP1P53384 320 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 RGS1Q08116 209 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 FSTL1Q12841 308 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ADAM15Q13444 863 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC142Q17RM4 750 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 FBXO11Q86XK2 927 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF557Q8N988 423 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms