RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ZNF140P52738 457 aaPredicted RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 ADARP55265 1226 aaKnown RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 IRX4P78413 519 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 RAD51Q06609 339 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ITGA9Q13797 1035 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 DNAL1Q4LDG9 190 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 SH2D4BQ5SQS7 431 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ARMC12Q5T9G4 340 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 HECTD2Q5U5R9 776 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 LRRC8EQ6NSJ5 796 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 NCEH1Q6PIU2 408 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 OTOP2Q7RTS6 562 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 SLC41A1Q8IVJ1 513 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 DENND6AQ8IWF6 608 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 NKAPQ8N5F7 415 aaKnown RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 ARL14EPQ8N8R7 260 aaPredicted RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 RFWD2Q8NHY2 731 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 RHEBL1Q8TAI7 183 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 DDI1Q8WTU0 396 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CMTM5Q96DZ9 223 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ATXN7L3BQ96GX2 97 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CDKN2AIPNLQ96HQ2 116 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 C1QTNF1Q9BXJ1 281 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CEP44Q9C0F1 390 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ATP13A3Q9H7F0 1226 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 TLE6Q9H808 572 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ZNF334Q9HCZ1 680 aaPredicted RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 SMPD4Q9NXE4 827 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 TAS2R13Q9NYV9 303 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CFAP97Q9P2B7 532 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 SLC2A6Q9UGQ3 507 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 GGT7Q9UJ14 662 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 OR51B4Q9Y5P0 310 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 SYCE1LA8MT33 242 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SPECC1L-ADORA2AF8WAN1 911 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 MUSKO15146 869 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 HDAC3O15379 428 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 PHGDHO43175 533 aaKnown RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 GREM1O60565 184 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 GOT2P00505 430 aaKnown RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TPBGLP0DKB5 382 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 ACRP10323 421 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 AOC1P19801 751 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SAT1P21673 171 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SERPINB3P29508 390 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CTNNB1P35222 781 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CD97P48960 835 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 RPL14P50914 215 aaKnown RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SUOXP51687 545 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 STC1P52823 247 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SNRPD1P62314 119 aaKnown RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 ELF3P78545 371 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 MPP1Q00013 466 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 NFKB2Q00653 900 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SATB1Q01826 763 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 BCL2L1Q07817 233 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CRY1Q16526 586 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 WASHC2DQ5SRD0 308 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 C6orf163Q5TEZ5 329 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TXNDC8Q6A555 127 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 PTAR1Q7Z6K3 402 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TMC8Q8IU68 726 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TMPRSS6Q8IU80 811 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CENPLQ8N0S6 344 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 FSTL5Q8N475 847 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CHCHD4Q8N4Q1 142 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 KCTD4Q8WVF5 259 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 UBXN10Q96LJ8 280 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TBATAQ96M53 351 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 ASB16Q96NS5 453 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TCF25Q9BQ70 676 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 BTBD10Q9BSF8 475 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CCDC28BQ9BUN5 200 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 LRRC3Q9BY71 257 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CDH19Q9H159 772 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 C1orf21Q9H246 121 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TLR9Q9NR96 1032 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 ABCB8Q9NUT2 735 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 ZDHHC7Q9NXF8 308 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 NDE1Q9NXR1 346 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 IL1RAPL1Q9NZN1 696 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 LHX3Q9UBR4 397 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 TAGLN3Q9UI15 199 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 VPS51Q9UID3 782 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 APPL1Q9UKG1 709 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 SLC8A2Q9UPR5 921 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 PCDHB1Q9Y5F3 818 aa9.99□□□□□ -0.81
PRPF3-206ENST00000493553 CCDC162PA2VCL2 907 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 TARM1B6A8C7 271 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 C5orf67F2Z3F1 127 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GOLGA8TH3BQL2 631 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 CHUKO15111 745 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GRM6O15303 877 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GYG2O15488 501 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 VPS26AO75436 327 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 IPO13O94829 963 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 ESR1P03372 595 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 PRKCGP05129 697 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 HSPA8P11142 646 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 FDXRP22570 491 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms