RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CERCAMQ5T4B2 595 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 ZNF648Q5T619 568 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 SYT10Q6XYQ8 523 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 CCL4L1Q8NHW4 92 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 SCARF2Q96GP6 870 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 DNAJC1Q96KC8 554 aaKnown RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 C19orf43Q9BQ61 176 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 DDX47Q9H0S4 455 aaKnown RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 OR2AG1Q9H205 316 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TRIM39Q9HCM9 518 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 CASS4Q9NQ75 786 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 NCKIPSDQ9NZQ3 722 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 ATXN10Q9UBB4 475 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 HEATR9A2RTY3 570 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GPR89AB7ZAQ6 455 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GAPDHSO14556 408 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GPR39O43194 453 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A9O60656 530 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 DNAJC6O75061 913 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 MTX2O75431 263 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 RFPL3O75679 317 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 TRIM16O95361 564 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ADRB1P08588 477 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GPR89BP0CG08 455 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 CKMT1AP12532 417 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 MYF5P13349 255 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ZNF8P17098 575 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A6P19224 532 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A1P22309 533 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A4P22310 534 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ACP1P24666 158 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A3P35503 534 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A5P35504 534 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 RPIAP49247 311 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ACADVLP49748 655 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 DUSP3P51452 185 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 CDK16Q00536 496 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 FOXC1Q12948 553 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GTF2H3Q13889 308 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 NR0B2Q15466 257 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 CCDC38Q502W7 563 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 PYCR3Q53H96 274 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 LDLRAP1Q5SW96 308 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ADGRG6Q86SQ4 1221 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 SLCO6A1Q86UG4 719 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 FAM46DQ8NEK8 389 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ZNF398Q8TD17 642 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GPBAR1Q8TDU6 330 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 STYXQ8WUJ0 223 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 C16orf45Q96MC5 204 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ZCCHC2Q9C0B9 1178 aaKnown RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ASB8Q9H765 288 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A7Q9HAW7 530 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A10Q9HAW8 530 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 UGT1A8Q9HAW9 530 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 NLE1Q9NVX2 485 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-209ENST00000493166 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GULP1Q9UBP9 304 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 RNF14Q9UBS8 474 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 TMPRSS11EQ9UL52 423 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 GPR34Q9UPC5 381 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 PRKAB1Q9Y478 270 aa12.65□□□□□ -0.38
CLIP2-209ENST00000493166 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 MROH6A6NGR9 719 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 B4DGG1 531 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 AP3B1O00203 1094 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 CCL22O00626 93 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 GRID2O43424 1007 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 VEGFDO43915 354 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 NUAK1O60285 661 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 ITGALP20701 1170 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 ADRA1DP25100 572 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 AKT1P31749 480 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 MC4RP32245 332 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 ACTR1BP42025 376 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 ACTR1AP61163 376 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 CTBSQ01459 385 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 TMEM115Q12893 351 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 ILKQ13418 452 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 NFATC2Q13469 925 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 PEX6Q13608 980 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 LRP8Q14114 963 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 KCNJ11Q14654 390 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 KHDC1Q4VXA5 237 aaKnown RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 SLC30A9Q6PML9 568 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
CLIP2-209ENST00000493166 CHST15Q7LFX5 561 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-209ENST00000493166 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms