RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NUP85Q9BW27 656 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ADGRE3Q9BY15 652 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 THAP2Q9H0W7 228 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 CARD9Q9H257 536 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 FAM83DQ9H4H8 585 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PCDH9Q9HC56 1237 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 WDR70Q9NW82 654 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PKD2L2Q9NZM6 624 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 UVRAGQ9P2Y5 699 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 NFKBIL1Q9UBC1 381 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ANAPC7Q9UJX3 599 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 CNOT6Q9ULM6 557 aaKnown RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 TMEM98Q9Y2Y6 226 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 B3GALT1Q9Y5Z6 326 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 UBR5O95071 2799 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 LRRK1Q38SD2 2015 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 MYO18BQ8IUG5 2567 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 A6NCN8 305 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 LILRA5A6NI73 299 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 EFCAB7A8K855 629 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 ANKRD66B4E2M5 251 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 NUAK1O60285 661 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 RAD1O60671 282 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 CLDN7O95471 211 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 RECKO95980 971 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 F3P13726 295 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 LIFP15018 202 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 WT1P19544 449 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 CSF2RBP32927 897 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 PBX1P40424 430 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 SPINT3P49223 89 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 DCDC1P59894 354 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 SRSF6Q13247 344 aaKnown RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 KCNAB2Q13303 367 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 DPYSL3Q14195 570 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 IQCB1Q15051 598 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 SLC14A2Q15849 920 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 NKAIN2Q5VXU1 208 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 NCBP2-AS2Q69YL0 99 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 TXNRD3NBQ6F5E7 133 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 DOK6Q6PKX4 331 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 PLXDC1Q8IUK5 500 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 RBM12BQ8IXT5 1001 aaKnown RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 KCTD6Q8NC69 237 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 ZNF564Q8TBZ8 553 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 SREK1Q8WXA9 508 aaKnown RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 HDAC11Q96DB2 347 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 RTP4Q96DX8 246 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 AGAP2Q99490 1192 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 MLPHQ9BV36 600 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 BRD8Q9H0E9 1235 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 OCIAD1Q9NX40 245 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 ZNHIT2Q9UHR6 403 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 ANAPC2Q9UJX6 822 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 CAPN11Q9UMQ6 739 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 CHKBQ9Y259 395 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 PLEKHM1Q9Y4G2 1056 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 TMEM184BQ9Y519 407 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-212ENST00000492407 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
HDAC3-212ENST00000492407 SCN8AQ9UQD0 1980 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 C1orf232A0A0U1RR37 186 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 GRID2O43424 1007 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 MFSD11O43934 449 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 KCNJ13O60928 360 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 PROSCO94903 275 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 MAP3K6O95382 1288 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ASMTLO95671 621 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 HNRNPH3P31942 346 aaKnown RBP9.03□□□□□ -0.96
HDAC3-212ENST00000492407 POLE2P56282 527 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 IFI35P80217 286 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-212ENST00000492407 DSC2Q02487 901 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 NIPAL4Q0D2K0 466 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 IL11RAQ14626 422 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 CLCA4Q14CN2 919 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 PTPRRQ15256 657 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 KIF26BQ2KJY2 2108 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ICE2Q659A1 982 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ANKS6Q68DC2 871 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ALKBH5Q6P6C2 394 aaKnown RBP9.03□□□□□ -0.96
HDAC3-212ENST00000492407 CYB5D1Q6P9G0 228 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 WASH2PQ6VEQ5 465 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 RFLNAQ6ZTI6 216 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 CHST15Q7LFX5 561 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-212ENST00000492407 FAM129CQ86XR2 697 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 PHYKPLQ8IUZ5 450 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 CCDC13Q8IYE1 715 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ESX1Q8N693 406 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 DTX3LQ8TDB6 740 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 WDR24Q96S15 920 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ARPC5LQ9BPX5 153 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 GPN2Q9H9Y4 310 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-212ENST00000492407 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 TRIM39Q9HCM9 518 aa9.03□□□□□ -0.96
HDAC3-212ENST00000492407 WASH6PQ9NQA3 447 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms