RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZSCAN5AQ9BUG6 496 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC12A9Q9BXP2 914 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 ZFYVE1Q9HBF4 777 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 TRIM39Q9HCM9 518 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 RAD18Q9NS91 495 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 SPTLC3Q9NUV7 552 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 KCNK4Q9NYG8 393 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 PKD2L2Q9NZM6 624 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 ATXN10Q9UBB4 475 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 TMPRSS11EQ9UL52 423 aa8.29□□□□□ -1.08
SMARCB1-207ENST00000491967 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GOLGA6CA6NDK9 693 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GOLGA6BA6NDN3 693 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 B8ZZF3 427 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GRID2O43424 1007 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 NDST3O95803 873 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 C9P02748 559 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GOLGA6DP0CG33 693 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 F3P13726 295 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNF8P17098 575 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ITGB6P18564 788 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 COMTP21964 271 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 PTPN3P26045 913 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 HMGCLP35914 325 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GJC1P36383 396 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 UBE2IP63279 158 aaKnown RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 MC2RQ01718 297 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 WASHC5Q12768 1159 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 LY6DQ14210 128 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 TAF1BQ53T94 588 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 KDELC1Q6UW63 502 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ABRAXAS1Q6UWZ7 409 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 MFSD7Q6UXD7 560 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 NPNTQ6UXI9 565 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 WASH2PQ6VEQ5 465 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 C11orf96Q7Z7L8 435 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ADGRG6Q86SQ4 1221 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 JAMLQ86YT9 394 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNF547Q8IVP9 402 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 RHOT1Q8IXI2 618 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 AVL9Q8NBF6 648 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 RCBTB1Q8NDN9 531 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 OR10G6Q8NH81 332 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 NKD1Q969G9 470 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 PMEPA1Q969W9 287 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 SH3KBP1Q96B97 665 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 CCDC42Q96M95 316 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNF830Q96NB3 372 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ASPSCR1Q9BZE9 553 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 EPB41L1Q9H4G0 881 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 WASH6PQ9NQA3 447 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 FBXO8Q9NRD0 319 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 GOLGA6AQ9NYA3 693 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 AKAP7Q9P0M2 348 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 TMEM9Q9P0T7 183 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 SEPT10Q9P0V9 454 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNHIT2Q9UHR6 403 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 PILRAQ9UKJ1 303 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 PCDHGA4Q9Y5G9 962 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 HEY1Q9Y5J3 304 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 B3GALT1Q9Y5Z6 326 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 SEC16AO15027 2179 aa8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 MN1Q10571 1320 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-207ENST00000491967 LILRA5A6NI73 299 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 STMND1H3BQB6 276 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TOX3O15405 576 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 MTSS1O43312 755 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 PSTPIP1O43586 416 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 MT-CYBP00156 380 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 ANKRD34CP0C6C1 535 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC2A4P14672 509 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 BPIP17213 487 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A3P35503 534 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 MAPK10P53779 464 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 HHEXQ03014 270 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 ADCY2Q08462 1091 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 AP1B1Q10567 949 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TFDP2Q14188 446 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 GALNT3Q14435 633 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 FAM182AQ5T1J6 154 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 AGAP9Q5VTM2 703 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 MARK2Q7KZI7 788 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 BZW1Q7L1Q6 419 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 CHST15Q7LFX5 561 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC9B2Q86UD5 537 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 CNGA4Q8IV77 575 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 RCOR2Q8IZ40 523 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TTC30BQ8N4P2 665 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms