RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CA5BQ9Y2D0 317 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 HEY1Q9Y5J3 304 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 A0A1B0GVT2 93 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 EME2A4GXA9 379 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 APOL1O14791 398 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 MATN3O15232 486 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 MAP3K7O43318 606 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 KRT36O76013 467 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PRKCGP05129 697 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 INHBAP08476 426 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 DHRS4L1P0CG22 281 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 GNSP15586 552 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 CCNCP24863 283 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 MAPK8P45983 427 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ARHGAP8P85298 464 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ROR2Q01974 943 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 RAD51Q06609 339 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 GRIK2Q13002 908 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PRKD1Q15139 912 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ZNF284Q2VY69 593 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 THEMIS2Q5TEJ8 643 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 MARC1Q5VT66 337 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 FAM91A1Q658Y4 838 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 ZC3H18Q86VM9 953 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 MGME1Q9BQP7 344 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 IQCGQ9H095 443 aaKnown RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 FBXO6Q9NRD1 293 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-219ENST00000491747 DLL3Q9NYJ7 618 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 TAS2R1Q9NYW7 299 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 SUSD2Q9UGT4 822 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 CACNA1EQ15878 2313 aa9.39□□□□□ -0.91
BRCA1-219ENST00000491747 A0A1W2PR77 199 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TSPAN11A1L157 253 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TM4SF5O14894 197 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 KLF11O14901 512 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 AREL1O15033 823 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 AP1G1O43747 822 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 FOXD2O60548 495 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 CST8O60676 142 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SPAG6O75602 509 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 PCDH8O95206 1070 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ETV4P43268 484 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SEMG2Q02383 582 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 AP1B1Q10567 949 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ZNF235Q14590 738 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ANKRD22Q5VYY1 191 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 BBS12Q6ZW61 710 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TTC7BQ86TV6 843 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 LRRC49Q8IUZ0 686 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 OXNAD1Q96HP4 312 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 FAM111AQ96PZ2 611 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TRAPPC9Q96Q05 1148 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 KLF6Q99612 283 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 GTPBP2Q9BX10 602 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 KCNK13Q9HB14 408 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 IL21RQ9HBE5 538 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 FZD3Q9NPG1 666 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 CPSF2Q9P2I0 782 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 MAGEA13PA6NCF6 341 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SLC31A1O15431 190 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SNUPNO95149 360 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 MYL2P10916 166 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 RPL22P35268 128 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 PGM1P36871 562 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 RENBPP51606 427 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 LIMK1P53667 647 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 GDF10P55107 478 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 BASP1P80723 227 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 PPIDQ08752 370 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 HNRNPDQ14103 355 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 GSTA3Q16772 222 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 KIF19Q2TAC6 998 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 C6orf163Q5TEZ5 329 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 RABEPKQ7Z6M1 372 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TRIM42Q8IWZ5 723 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 MINDY1Q8N5J2 469 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 CCNYQ8ND76 341 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 CCDC110Q8TBZ0 833 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ZFAND2BQ8WV99 257 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ECHDC3Q96DC8 303 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SERAC1Q96JX3 654 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 TUBGCP5Q96RT8 1024 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms