RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	FAM96A	Q9H5X1	160 aa		18.4	■□□□□ 0.54
C4A-256	ENST00000490663	ARNT2	Q9HBZ2	717 aa		18.4	■□□□□ 0.54
C4A-256	ENST00000490663	ZNHIT2	Q9UHR6	403 aa		18.4	■□□□□ 0.54
C4A-256	ENST00000490663	KLK13	Q9UKR3	277 aa		18.4	■□□□□ 0.54
C4A-256	ENST00000490663	TCRBV7S3A2	A0A539	114 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	FAM149A	A5PLN7	773 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	LDB2	O43679	373 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	PHF2	O75151	1096 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	RFPL3	O75679	317 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	KRT14	P02533	472 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	PRSS56	P0CW18	603 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	ZNF8	P17098	575 aa	Predicted RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	CKMT2	P17540	419 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	COIL	P38432	576 aa	Predicted RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	CTBS	Q01459	385 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	PYCR3	Q53H96	274 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	PERM1	Q5SV97	790 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	CCDC137	Q6PK04	289 aa	Known RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	CHST15	Q7LFX5	561 aa	Predicted RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	ADGRG6	Q86SQ4	1221 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	GALNT13	Q8IUC8	556 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	PHYKPL	Q8IUZ5	450 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	RAVER1	Q8IY67	606 aa	Known RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	DNAAF3	Q8N9W5	541 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	FAM46D	Q8NEK8	389 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	BRSK1	Q8TDC3	778 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	ACTRT1	Q8TDG2	376 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	LRRC45	Q96CN5	670 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	TBATA	Q96M53	351 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	SCNM1	Q9BWG6	230 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	BOC	Q9BWV1	1114 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	RAD18	Q9NS91	495 aa		18.39	■□□□□ 0.53
C4A-256	ENST00000490663	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.39	■□□□□ 0.53
C4A-256	ENST00000490663	MAP1B	P46821	2468 aa	Known RBP	18.38	■□□□□ 0.53
C4A-256	ENST00000490663	C2orf81	A6NN90	581 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	PSMD3	O43242	534 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	PRAMEF1	O95521	474 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	CKMT1A	P12532	417 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	ACP5	P13686	325 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	GPS1	Q13098	491 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	CYP1B1	Q16678	543 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	EFL1	Q7Z2Z2	1120 aa	Known RBP	18.38	■□□□□ 0.53
C4A-256	ENST00000490663	RAB44	Q7Z6P3	723 aa	Predicted RBP	18.38	■□□□□ 0.53
C4A-256	ENST00000490663	IFI44	Q8TCB0	444 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	DUSP23	Q9BVJ7	150 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	DDX47	Q9H0S4	455 aa	Known RBP	18.38	■□□□□ 0.53
C4A-256	ENST00000490663	WASF3	Q9UPY6	502 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	KCNK6	Q9Y257	313 aa		18.38	■□□□□ 0.53
C4A-256	ENST00000490663	SNRNP200	O75643	2136 aa	Known RBP	18.38	■□□□□ 0.53
C4A-256	ENST00000490663	CTAGE9	A4FU28	777 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	OR51F1	A6NGY5	319 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	TPP1	O14773	563 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	DKK1	O94907	266 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	CRTAM	O95727	393 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	EML2	O95834	649 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	TCP1	P17987	556 aa	Known RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ACP1	P24666	158 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ACTR1B	P42025	376 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	CDKN1C	P49918	316 aa	Predicted RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	MAZ	P56270	477 aa	Known RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ACTR1A	P61163	376 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	CRADD	P78560	199 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	XIAP	P98170	497 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ILF3	Q12906	894 aa	Known RBP eCLIP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	PEX6	Q13608	980 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	PAPD7	Q5XG87	772 aa	Known RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	GPBAR1	Q8TDU6	330 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ADAMTS14	Q8WXS8	1223 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	SCARF2	Q96GP6	870 aa	Predicted RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	NAP1L3	Q99457	506 aa	Predicted RBP	18.37	■□□□□ 0.53
C4A-256	ENST00000490663	CDH19	Q9H159	772 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	DPEP2	Q9H4A9	486 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	CASS4	Q9NQ75	786 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	HOMER3	Q9NSC5	361 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	TAAR2	Q9P1P5	351 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	VPS18	Q9P253	973 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	ANKRD12	Q6UB98	2062 aa		18.37	■□□□□ 0.53
C4A-256	ENST00000490663	TRBV23OR9-2	A0A075B6M9	112 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	CES2	O00748	559 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	NOBOX	O60393	691 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	SUN1	O94901	812 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	ARSD	P51689	593 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	SESN2	P58004	480 aa	Predicted RBP	18.36	■□□□□ 0.53
C4A-256	ENST00000490663	ADAMTS20	P59510	1910 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	CDH17	Q12864	832 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	NR0B2	Q15466	257 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	GPRC6A	Q5T6X5	926 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	ANKRD22	Q5VYY1	191 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	DET1	Q7L5Y6	550 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	LINC00523	Q86TU6	105 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	FAM181A	Q8N9Y4	354 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	VPS35	Q96QK1	796 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	GSDMC	Q9BYG8	508 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	ASB8	Q9H765	288 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	SYNDIG1	Q9H7V2	258 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	TRIM39	Q9HCM9	518 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	TRNAU1AP	Q9NX07	287 aa	Known RBP	18.36	■□□□□ 0.53
C4A-256	ENST00000490663	SLC2A6	Q9UGQ3	507 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	RABGEF1	Q9UJ41	708 aa		18.36	■□□□□ 0.53
C4A-256	ENST00000490663	GOLGA6L10	A0A0M3HER8	536 aa		18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms