RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 RNF31Q96EP0 1072 aa15.38■□□□□ 0.05
COL2A1-207ENST00000490609 TRIB3Q96RU7 358 aa15.38■□□□□ 0.05
COL2A1-207ENST00000490609 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
COL2A1-207ENST00000490609 SLC30A1Q9Y6M5 507 aa15.38■□□□□ 0.05
COL2A1-207ENST00000490609 SEC16AO15027 2179 aa15.38■□□□□ 0.05
COL2A1-207ENST00000490609 ITPR2Q14571 2701 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 A0A1W2PQJ5 194 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ANKRD66B4E2M5 251 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 PYGLP06737 847 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ACP5P13686 325 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 F3P13726 295 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF28P17035 718 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF8P17098 575 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 CES1P23141 567 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 GFERP55789 205 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 RAB15P59190 212 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 RPL26P61254 145 aaKnown RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ZBTB17Q13105 803 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 BIRC2Q13490 618 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 KRT81Q14533 505 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 LYSMD3Q7Z3D4 306 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 NLGN4XQ8N0W4 816 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 GPR26Q8NDV2 337 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 NLGN4YQ8NFZ3 816 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 PLEKHG4BQ96PX9 1271 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 FAM83DQ9H4H8 585 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF624Q9P2J8 865 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 AMACRQ9UHK6 382 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 TUBD1Q9UJT1 453 aa15.37■□□□□ 0.05
COL2A1-207ENST00000490609 RPL26L1Q9UNX3 145 aaKnown RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 MRPS18BQ9Y676 258 aaKnown RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 MN1Q10571 1320 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-207ENST00000490609 CRYBG3Q68DQ2 2970 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 C1orf232A0A0U1RR37 186 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF891A8MT65 544 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 K7EM74 188 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 GRID2O43424 1007 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 STK17BO94768 372 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 JCHAINP01591 159 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 C9P02748 559 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 FURINP09958 794 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 BRAFP15056 766 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 MAP4P27816 1152 aaKnown RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 CD86P42081 329 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 CLCNKAP51800 687 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 EPHB1P54762 984 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 EPHA4P54764 986 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 KHDC1Q4VXA5 237 aaKnown RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 CCDC122Q5T0U0 273 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 ADGRG6Q86SQ4 1221 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF547Q8IVP9 402 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 CCDC112Q8NEF3 446 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 RAPGEF5Q92565 580 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 TADA1Q96BN2 335 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 AHCYL2Q96HN2 611 aaKnown RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 GBP4Q96PP9 640 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 TEFMQ96QE5 360 aaKnown RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF670Q9BS34 389 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 RMI1Q9H9A7 625 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 ZNF71Q9NQZ8 489 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-207ENST00000490609 CPNE7Q9UBL6 633 aa15.36■□□□□ 0.05
COL2A1-207ENST00000490609 C3orf70A6NLC5 250 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 SMTNL1A8MU46 457 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 MYO1FO00160 1098 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 KCNK1O00180 336 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CHUKO15111 745 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 SNX2O60749 519 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 SERPING1P05155 500 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 PRKAR1AP10644 381 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 SLC19A1P41440 591 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CCR10P46092 362 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 FOXK1P85037 733 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 ABHD18Q0P651 414 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CDC20Q12834 499 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 FILIP1LQ4L180 1135 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 ALKBH5Q6P6C2 394 aaKnown RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CEACAM20Q6UY09 585 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 HDAC11Q96DB2 347 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 MLPHQ9BV36 600 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 PACSIN1Q9BY11 444 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 NAT10Q9H0A0 1025 aaKnown RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 OR2AG1Q9H205 316 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CARD9Q9H257 536 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 GPN2Q9H9Y4 310 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-207ENST00000490609 KLHL3Q9UH77 587 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 CAPN11Q9UMQ6 739 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 SHANK1Q9Y566 2161 aa15.35■□□□□ 0.05
COL2A1-207ENST00000490609 KIR2DS5A0A0G2JLQ3 304 aa15.34■□□□□ 0.05
COL2A1-207ENST00000490609 A0A0G2JNG1 304 aa15.34■□□□□ 0.05
COL2A1-207ENST00000490609 RGSL1A5PLK6 1076 aa15.34■□□□□ 0.05
COL2A1-207ENST00000490609 LILRA5A6NI73 299 aa15.34■□□□□ 0.05
COL2A1-207ENST00000490609 KIR2DS3K7RE56 304 aa15.34■□□□□ 0.05
COL2A1-207ENST00000490609 CAPN5O15484 640 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-207ENST00000490609 PROSCO94903 275 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms