RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 OGFRQ9NZT2 677 aa4.8□□□□□ -1.64
HMGB1P38-201ENST00000490557 ZNF215Q9UL58 517 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P38-201ENST00000490557 A8MZ25 164 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 MAP2K7O14733 419 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 KCNN4O15554 427 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 BUB3O43684 328 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 DOK2O60496 412 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 TSPAN9O75954 239 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 ICAM1P05362 532 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 HADHAP40939 763 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 EEF1A1P68104 462 aaKnown RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 RELQ04864 619 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 ZBTB17Q13105 803 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 PCGF3Q3KNV8 242 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 SOWAHCQ53LP3 525 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 C18orf63Q68DL7 685 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 TUBA1AQ71U36 451 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 KMT5CQ86Y97 462 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 ZNF441Q8N8Z8 693 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 POC1AQ8NBT0 407 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 THAP6Q8TBB0 222 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 SLC20A1Q8WUM9 679 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 PIGTQ969N2 578 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 FEM1CQ96JP0 617 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 SMC6Q96SB8 1091 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 TUBA1CQ9BQE3 449 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 C1QTNF1Q9BXJ1 281 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 TMX4Q9H1E5 349 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 MAGIXQ9H6Y5 334 aa4.79□□□□□ -1.64
HMGB1P38-201ENST00000490557 A6NCN8 305 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 ANKRD28O15084 1053 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 TPPPO94811 219 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 KCNK5O95279 499 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 HSP90AA1P07900 732 aaKnown RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MYOD1P15172 320 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MSH2P43246 934 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 TERF1P54274 439 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MC1RQ01726 317 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SREBF2Q12772 1141 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SYT16Q17RD7 645 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 ASTE1Q2TB18 679 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 JADE1Q6IE81 842 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 PAPD4Q6PIY7 484 aaKnown RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 EPHX4Q8IUS5 362 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MAP7D3Q8IWC1 876 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 MAB21L3Q8N8X9 362 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 ACVR1CQ8NER5 493 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SPATA22Q8NHS9 363 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SLC38A5Q8WUX1 472 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 ABTB1Q969K4 478 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 RHBDF1Q96CC6 855 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SAT2Q96F10 170 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 CCDC34Q96HJ3 373 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 GAD1Q99259 594 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 EPYCQ99645 322 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SPRY4Q9C004 299 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 FBXL17Q9UF56 701 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 SWAP70Q9UH65 585 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 DBNLQ9UJU6 430 aaKnown RBP4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 VPS28Q9UK41 221 aa4.78□□□□□ -1.64
HMGB1P38-201ENST00000490557 CGNL1Q0VF96 1302 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 PRSS44E7EML9 344 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 CAMTA2O94983 1202 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 CDH1P12830 882 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 ALOX12P18054 663 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 GABRB1P18505 474 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 DGKAP23743 735 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 NR2F2P24468 414 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 TM4SF1P30408 202 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 PSMB10P40306 273 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 APOBEC1P41238 236 aaKnown RBP4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 GPR143P51810 404 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 COG7P83436 770 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 PLIN5Q00G26 463 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 TROAPQ12815 778 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 CHAF1BQ13112 559 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 AIMP2Q13155 320 aaKnown RBP4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 ZNF234Q14588 700 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 KIAA0930Q6ICG6 404 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 WBP2NLQ6ICG8 309 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 SATL1Q86VE3 508 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 NR2C2APQ86WQ0 139 aa4.77□□□□□ -1.65
HMGB1P38-201ENST00000490557 ARID3BQ8IVW6 561 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms