RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TMEM35BQ8NCS4 154 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ZFP28Q8NHY6 868 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 LMO3Q8TAP4 145 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 UBA3Q8TBC4 463 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ACTRT1Q8TDG2 376 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF473Q8WTR7 871 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 OSCP1Q8WVF1 389 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF606Q8WXB4 792 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 IFT81Q8WYA0 676 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 SHC3Q92529 594 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 USP13Q92995 863 aaPredicted RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 LRRC45Q96CN5 670 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 MS4A14Q96JA4 679 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CABS1Q96KC9 395 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 XPO6Q96QU8 1125 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 TWNKQ96RR1 684 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 DCLRE1CQ96SD1 692 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CYP2S1Q96SQ9 504 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 PSMB7Q99436 277 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 KRT12Q99456 494 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 NCAPGQ9BPX3 1015 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 GANQ9H2C0 597 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 LHX5Q9H2C1 402 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ACTR5Q9H9F9 607 aaPredicted RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 BCO1Q9HAY6 547 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 NLRC4Q9NPP4 1024 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 HEBP1Q9NRV9 189 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CCM2LQ9NUG4 571 aaPredicted RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 SEPT11Q9NVA2 429 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 GEMIN8Q9NWZ8 242 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 MOCS1Q9NZB8 636 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 SMARCAL1Q9NZC9 954 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 IL37Q9NZH6 218 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CFAP97Q9P2B7 532 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 WDR35Q9P2L0 1181 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 INTUQ9ULD6 942 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 NFU1Q9UMS0 254 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 NDRG2Q9UN36 371 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CNTN6Q9UQ52 1028 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 CPQQ9Y646 472 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 TSC2P49815 1807 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 DOCK8Q8NF50 2099 aa4.8□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF638Q14966 1978 aaKnown RBP4.8□□□□□ -1.64
CSTF1-205ENST00000490539 DENND4AQ7Z401 1863 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RELNP78509 3460 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 DOCK6Q96HP0 2047 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 F5P12259 2224 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 A0A087X0T9 212 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 C5orf60A6NFR6 353 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 FAM171A2A8MVW0 826 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 ALG1L2C9J202 215 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 F8VZ95 297 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 SPECC1L-ADORA2AF8WAN1 911 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 PGRMC1O00264 195 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 FOXN3O00409 490 aaPredicted RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 TRIM24O15164 1050 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RAD51CO43502 376 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 MOSPD3O75425 235 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 BEST1O76090 585 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 ENDOD1O94919 500 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 PRAMEF12O95522 483 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 OAS1P00973 400 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 KRT14P02533 472 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 APOEP02649 317 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 FAM228BP0C875 321 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RBP3P10745 1247 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 IRF1P10914 325 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 FERP16591 822 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 FCARP24071 287 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 AVPR2P30518 371 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 PRKCIP41743 596 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 NSFP46459 744 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RPS9P46781 194 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RGS7P49802 495 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF132P52740 706 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 CACNA2D1P54289 1103 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 VCPP55072 806 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 YWHAZP63104 245 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 MRPS25P82663 173 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 MXRA7P84157 204 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 GAD2Q05329 585 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 ACTN3Q08043 901 aaPredicted RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 NOMO1Q15155 1222 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 ZNF77Q15935 545 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 CCDC142Q17RM4 750 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 MST1LQ2TV78 715 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 CRB2Q5IJ48 1285 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 CEP85LQ5SZL2 805 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 BSPRYQ5W0U4 402 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 NUGGCQ68CJ6 796 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 PM20D1Q6GTS8 502 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 DPY19L2P1Q6NXN4 242 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 PGM2L1Q6PCE3 622 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 C6orf89Q6UWU4 347 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 LHFPL2Q6ZUX7 228 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 TRMT11Q7Z4G4 463 aaKnown RBP4.79□□□□□ -1.64
CSTF1-205ENST00000490539 MAATS1Q7Z4T9 603 aa4.79□□□□□ -1.64
CSTF1-205ENST00000490539 IRF2BP2Q7Z5L9 587 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms