RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TMEM63CQ9P1W3 806 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 AJAP1Q9UKB5 411 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 TCFL5Q9UL49 500 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 SPTBP11277 2137 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 PRAMEF11O60813 436 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 ATP1A1P05023 1023 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 EDN3P14138 238 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SLC2A4P14672 509 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SCNN1BP51168 640 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 MARSP56192 900 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 PPP1CAP62136 330 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 DPTQ07507 201 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 PAK1Q13153 545 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 PNOCQ13519 176 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF235Q14590 738 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 VWA2Q5GFL6 755 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 IRGCQ6NXR0 463 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CYB5D1Q6P9G0 228 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 TECPR1Q7Z6L1 1165 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 TSPAN33Q86UF1 283 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 ZADH2Q8N4Q0 377 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SIDT2Q8NBJ9 832 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SLC38A9Q8NBW4 561 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 AGAP2Q99490 1192 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 MLPHQ9BV36 600 aaPredicted RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 ABCG8Q9H221 673 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 WASH6PQ9NQA3 447 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 SCHIP1Q9P0W5 487 aaPredicted RBP13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
EXOSC3-207ENST00000490516 IGHV5-51A0A0C4DH38 117 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 CPNE3O75131 537 aaKnown RBP13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 PALMO75781 387 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 F13A1P00488 732 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 EBLN1P0CF75 366 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 CAPN3P20807 821 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 SSTR2P30874 369 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 TRIM65Q6PJ69 517 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 TMEM35BQ8NCS4 154 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 RELTQ969Z4 430 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 AP2M1Q96CW1 435 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 COX14Q96I36 57 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 CELF6Q96J87 481 aaKnown RBP13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF552Q9H707 407 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 UCK1Q9HA47 277 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 PCDHGC4Q9Y5F7 938 aa13.47□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF469Q96JG9 3925 aaPredicted RBP13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 FAM237AA0A1B0GTK4 181 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 OR5K4A6NMS3 321 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 SCRG1O75711 98 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 ALPPP05187 535 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 RAB40ALP0C0E4 278 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 ZSCAN22P10073 491 aaPredicted RBP13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 CD1EP15812 388 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 SLC9A1P19634 815 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 CDH5P33151 784 aaPredicted RBP13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 CAPZBP47756 277 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 MYBPC3Q14896 1274 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 SMTNL2Q2TAL5 461 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 ATL3Q6DD88 541 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 MRGPRGQ86SM5 289 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 FAR1Q8WVX9 515 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 RXFP2Q8WXD0 754 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 ZDHHC12Q96GR4 267 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF514Q96K75 400 aaPredicted RBP13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 TRAPPC9Q96Q05 1148 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 NLNQ9BYT8 704 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 GOLPH3LQ9H4A5 285 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 LRRC19Q9H756 370 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 FGF21Q9NSA1 209 aa13.46□□□□□ -0.25
EXOSC3-207ENST00000490516 DOCK10Q96BY6 2186 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 MASP2O00187 686 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 PSMD11O00231 422 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 CREB3O43889 395 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 CPP00450 1065 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 VIPP01282 170 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 CD99P14209 185 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 DRD2P14416 443 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 XRCC1P18887 633 aaPredicted RBP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 SLC19A1P41440 591 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 PRAMEF17Q5VTA0 474 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms