RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 IP6K2Q9UHH9 426 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 B3GNT3Q9Y2A9 372 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 TMEM98Q9Y2Y6 226 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 MRPL11Q9Y3B7 192 aaKnown RBP3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 TTLL3Q9Y4R7 772 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 SPO11Q9Y5K1 396 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 FADS3Q9Y5Q0 445 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 AP4B1Q9Y6B7 739 aa3.48□□□□□ -1.85
CRNKL1-203ENST00000490258 COL4A3Q01955 1670 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 MIA3Q5JRA6 1907 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PCNTO95613 3336 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 WDR91A4D1P6 747 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 C2orf78A6NCI8 922 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TMEM247A6NEH6 219 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 FAM159BA6NKW6 160 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 MEI4A8MW99 385 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TRIM49D1C9J1S8 452 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 C19orf81C9J6K1 198 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 H3BNH8 94 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 BOLA2-SMG1P6H3BVE0 249 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 K7ENM7 598 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CXCL11O14625 94 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 B4GALT5O43286 388 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TIMM44O43615 452 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 DKC1O60832 514 aaKnown RBP eCLIP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF189O75820 626 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 BCAS2O75934 225 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 KRT37O76014 449 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TOMM70O94826 608 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 STBD1O95210 358 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PGM3O95394 542 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 VTNP04004 478 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SERPINE1P05121 402 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PRKCGP05129 697 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SNRPAP09012 282 aaKnown RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 WEE2P0C1S8 567 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 RBP3P10745 1247 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 THRAP10827 490 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF26P17031 533 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PTPN2P17706 415 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CD58P19256 250 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CNTFP26441 200 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GABRB3P28472 473 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SSTR1P30872 391 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CDH5P33151 784 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 RPL22P35268 128 aaKnown RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 HOXD12P35452 270 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TCF7P36402 384 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 MLH1P40692 756 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 MAGEA3P43357 314 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 MAGEA12P43365 314 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GABRB2P47870 512 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GATMP50440 423 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SERPINB9P50453 376 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 LBX1P52954 281 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 AQP5P55064 265 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 HDAC4P56524 1084 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 RAC3P60763 192 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ACTR2P61160 394 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 RPS3AP61247 264 aaKnown RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PSMC5P62195 406 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC25A3Q00325 362 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CDKL1Q00532 357 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC6A3Q01959 620 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GHRHRQ02643 423 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC25A11Q02978 314 aaKnown RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GAD2Q05329 585 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 KDSRQ06136 332 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CYP24A1Q07973 514 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 NAB1Q13506 487 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PIGHQ14442 188 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GRB14Q14449 540 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 KCTD2Q14681 263 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PCBP1Q15365 356 aaKnown RBP eCLIP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TGFBIQ15582 683 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CHI3L2Q15782 390 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CNGA3Q16281 694 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SNRNP35Q16560 246 aaKnown RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF829Q3KNS6 432 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CCDC92Q53HC0 331 aaPredicted RBP3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 PIGGQ5H8A4 983 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TFDP3Q5H9I0 405 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 SWSAP1Q6NVH7 229 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 NIPAL1Q6NVV3 410 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 ERAP2Q6P179 960 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TMEM53Q6P2H8 277 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 LRRC8BQ6P9F7 803 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 C17orf99Q6UX52 265 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 UNQ6494/PRO21346Q6UXR6 183 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 DCDC5Q6ZRR9 648 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 USP30Q70CQ3 517 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CCDC80Q76M96 950 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 NIPA1Q7RTP0 329 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 GSTA5Q7RTV2 222 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 CLEC14AQ86T13 490 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 USP37Q86T82 979 aa3.47□□□□□ -1.85
CRNKL1-203ENST00000490258 TLK2Q86UE8 772 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms