RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 DNAJC6O75061 913 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 DLGAP3O95886 979 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 MBD3O95983 291 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 MT-ND3P03897 115 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 ATP1A1P05023 1023 aaKnown RBP11.65□□□□□ -0.54
FDPS-215ENST00000490140 PDHA1P08559 390 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 GP1BBP13224 206 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 VCLP18206 1134 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 CCNCP24863 283 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 CLCNKAP51800 687 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 FOXM1Q08050 763 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 GALNT2Q10471 571 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 IL11RAQ14626 422 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 DEFB109BQ30KR1 87 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 HENMT1Q5T8I9 393 aaKnown RBP11.65□□□□□ -0.54
FDPS-215ENST00000490140 PDPK2PQ6A1A2 396 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 C16orf46Q6P387 395 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 RBM12BQ8IXT5 1001 aaKnown RBP11.65□□□□□ -0.54
FDPS-215ENST00000490140 FAM26EQ8N5C1 309 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 LPCAT1Q8NF37 534 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 ZNF670Q9BS34 389 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 ZSCAN5AQ9BUG6 496 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 OSGEPL1Q9H4B0 414 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
FDPS-215ENST00000490140 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
FDPS-215ENST00000490140 RBM22Q9NW64 420 aaKnown RBP eCLIP11.65□□□□□ -0.547e-6■■■■□ 24.6
FDPS-215ENST00000490140 CPNE7Q9UBL6 633 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 TBC1D29Q9UFV1 150 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 KLHL3Q9UH77 587 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 POLHQ9Y253 713 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 KCNK6Q9Y257 313 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 PLEKHM1Q9Y4G2 1056 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 RPS6KL1Q9Y6S9 549 aa11.65□□□□□ -0.54
FDPS-215ENST00000490140 A6NCN8 305 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 PRR19A6NJB7 356 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.55
FDPS-215ENST00000490140 MFSD11O43934 449 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 NUAK1O60285 661 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 RASSF9O75901 435 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 CLDN7O95471 211 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 VIPP01282 170 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 SPINT3P49223 89 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 DCDC1P59894 354 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 DSC2Q02487 901 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 SLC25A11Q02978 314 aaKnown RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 PDK2Q15119 407 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 INSCQ1MX18 579 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 CCDC183Q5T5S1 534 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 C6orf15Q6UXA7 325 aaPredicted RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 RASGRP3Q8IV61 690 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 TEX19Q8NA77 164 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 MAML1Q92585 1016 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 TSGA13Q96PP4 275 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 BPIFA3Q9BQP9 254 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 MLPHQ9BV36 600 aaPredicted RBP11.64□□□□□ -0.55
FDPS-215ENST00000490140 SPRY4Q9C004 299 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 CHKBQ9Y259 395 aa11.64□□□□□ -0.55
FDPS-215ENST00000490140 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 RFPL1O75677 317 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 UBXN7O94888 489 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 RECKO95980 971 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 C9P02748 559 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 KRT7P08729 469 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 AMD1P17707 334 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 XRCC1P18887 633 aaPredicted RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 DLSTP36957 453 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 TPM4P67936 248 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 TCTN3Q6NUS6 607 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 KLHL35Q6PF15 583 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 CCDC13Q8IYE1 715 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 UNC5BQ8IZJ1 945 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
FDPS-215ENST00000490140 KCTD6Q8NC69 237 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 FAM71BQ8TC56 605 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 C9orf72Q96LT7 481 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 AGAP2Q99490 1192 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 NUP85Q9BW27 656 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 ZNF768Q9H5H4 540 aaKnown RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 ZFYVE1Q9HBF4 777 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 KLC4Q9NSK0 619 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 POT1Q9NUX5 634 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 SIDT1Q9NXL6 827 aaKnown RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 PRKAB1Q9Y478 270 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 OAS3Q9Y6K5 1087 aaKnown RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 RELNP78509 3460 aa11.63□□□□□ -0.55
FDPS-215ENST00000490140 USP9XQ93008 2570 aaPredicted RBP11.63□□□□□ -0.55
FDPS-215ENST00000490140 CYSRT1A8MQ03 144 aa11.62□□□□□ -0.55
FDPS-215ENST00000490140 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
FDPS-215ENST00000490140 KMOO15229 486 aa11.62□□□□□ -0.55
FDPS-215ENST00000490140 EML2O95834 649 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms