RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 STAG3L4Q8TBR4 150 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TOP1MTQ969P6 601 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ZNF558Q96NG5 402 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 BTBD9Q96Q07 612 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ATOH8Q96SQ7 321 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NPAS2Q99743 824 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 VN1R3Q9BXE9 311 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NUSAP1Q9BXS6 441 aaKnown RBP9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PFDN4Q9NQP4 134 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PDP2Q9P2J9 529 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LHX3Q9UBR4 397 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SUCOQ9UBS9 1254 aaKnown RBP9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ADAMTS6Q9UKP5 1117 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SARDHQ9UL12 918 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DTNAQ9Y4J8 743 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ACTL7AQ9Y615 435 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 OAS3Q9Y6K5 1087 aaKnown RBP9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KIAA1671Q9BY89 1806 aa9.51□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NPEPPSL1A6NEC2 478 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 H0Y626 953 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 STX16-NPEPL1H3BU86 382 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UBFD1O14562 309 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 STX16O14662 325 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PRRG1O14668 218 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KIF1CO43896 1103 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TBL1XO60907 577 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ECI2O75521 394 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 BCAS2O75934 225 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CDK14O94921 469 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ABLIM3O94929 683 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 F11P03951 625 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 URODP06132 367 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 FGF4P08620 206 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RPS17P08708 135 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PEX2P28328 305 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 EEF1DP29692 281 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ACADVLP49748 655 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 EPHB3P54753 998 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CCL23P55773 120 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RHOAP61586 193 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 AP1S1P61966 158 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ARF5P84085 180 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TRAF2Q12933 501 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ADGRE1Q14246 886 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 GRAMD1BQ3KR37 738 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SAMD4BQ5PRF9 694 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 OGFRL1Q5TC84 451 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ANKS6Q68DC2 871 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CLEC6AQ6EIG7 209 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UGT3A1Q6NUS8 523 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PRMT9Q6P2P2 845 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NCEH1Q6PIU2 408 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TXNDC11Q6PKC3 985 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LARP4Q71RC2 724 aaKnown RBP eCLIP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RPS27LQ71UM5 84 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 C16orf59Q7L2K0 433 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CARNMT1Q8N4J0 409 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TTC30BQ8N4P2 665 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PCYOX1LQ8NBM8 494 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 BHLHE22Q8NFJ8 381 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RIN3Q8TB24 985 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UCMAQ8WVF2 138 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TWIST2Q8WVJ9 160 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MYO19Q96H55 970 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TMEM169Q96HH4 297 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LRGUKQ96M69 825 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 GPR21Q99679 349 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CLSTN3Q9BQT9 956 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 Q9H521 79 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TNFRSF12AQ9NP84 129 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MID1IP1Q9NPA3 183 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 GKN1Q9NS71 199 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SPATS2LQ9NUQ6 558 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CACNA2D2Q9NY47 1150 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ADA2Q9NZK5 511 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 EPS15L1Q9UBC2 864 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 STOML2Q9UJZ1 356 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LSM7Q9UK45 103 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ZNF711Q9Y462 761 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MTF2Q9Y483 593 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DNMT3AQ9Y6K1 912 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
RAB3GAP1-205ENST00000489858 C2orf78A6NCI8 922 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 EIF4E1BA6NMX2 242 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 H3BMM5 538 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 H7C0S8 307 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 BTN3A1O00481 513 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PIP5K1BO14986 540 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CLASP2O75122 1294 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CHEK2O96017 543 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 C1RP00736 705 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PRLP01236 227 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ESR1P03372 595 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PRSS56P0CW18 603 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UQCRBP14927 111 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LBPP18428 481 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LAG3P18627 525 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TSPAN8P19075 237 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms