RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 A8MU76 341 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 MYO1FO00160 1098 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 KCNK1O00180 336 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 PROSCO94903 275 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 ACP5P13686 325 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 CSTF2P33240 577 aaKnown RBP eCLIP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 CD86P42081 329 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 EPHB1P54762 984 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 HHEXQ03014 270 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 NFATC2Q13469 925 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 CCDC122Q5T0U0 273 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 TIGD7Q6NT04 549 aaPredicted RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 WDR74Q6RFH5 385 aaPredicted RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 CHST15Q7LFX5 561 aaPredicted RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 FAM129CQ86XR2 697 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 PLD5Q8N7P1 536 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 SLC38A3Q99624 504 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 SARS2Q9NP81 518 aaKnown RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 SIDT1Q9NXL6 827 aaKnown RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 AKAP7Q9P0M2 348 aaPredicted RBP11.63□□□□□ -0.55
ACTN4-206ENST00000489451 ATXN10Q9UBB4 475 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 AMACRQ9UHK6 382 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 ZNHIT2Q9UHR6 403 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 C3orf70A6NLC5 250 aaPredicted RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 NKX2-8O15522 239 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 NUAK1O60285 661 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ASMTLO95671 621 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 JCHAINP01591 159 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 PYGLP06737 847 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 F3P13726 295 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ZNF8P17098 575 aaPredicted RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 SSR1P43307 286 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 GFERP55789 205 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 RPL26P61254 145 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 UBE2IP63279 158 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 MC2RQ01718 297 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 PPIDQ08752 370 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 BIRC2Q13490 618 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 TRIM14Q14142 442 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 GALNT3Q14435 633 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ASTE1Q2TB18 679 aaPredicted RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 KHDC1Q4VXA5 237 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 SNAP47Q5SQN1 464 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 RAVER1Q8IY67 606 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 CCDC13Q8IYE1 715 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 UNC5BQ8IZJ1 945 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 CACNA2D3Q8IZS8 1091 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 IL22RA1Q8N6P7 574 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 KCTD6Q8NC69 237 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 GPR26Q8NDV2 337 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 OR10G6Q8NH81 332 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 TADA1Q96BN2 335 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 RNF31Q96EP0 1072 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 DPYSL5Q9BPU6 564 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 CEP41Q9BYV8 373 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 PRDM8Q9NQV8 689 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 ZNHIT6Q9NWK9 470 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 SLC23A2Q9UGH3 650 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 TMPRSS11EQ9UL52 423 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 RPL26L1Q9UNX3 145 aaKnown RBP11.62□□□□□ -0.55
ACTN4-206ENST00000489451 FLNCQ14315 2725 aa11.62□□□□□ -0.55
ACTN4-206ENST00000489451 MN1Q10571 1320 aaPredicted RBP11.61□□□□□ -0.55
ACTN4-206ENST00000489451 DLGAP3O95886 979 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 PIRTP0C851 137 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 ZNF28P17035 718 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 CES1P23141 567 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 F8A1P23610 371 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 KDELR1P24390 212 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 OAS2P29728 719 aaKnown RBP11.61□□□□□ -0.55
ACTN4-206ENST00000489451 POLE2P56282 527 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 RAB15P59190 212 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 IFI35P80217 286 aaPredicted RBP11.61□□□□□ -0.55
ACTN4-206ENST00000489451 PEX6Q13608 980 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 PDK2Q15119 407 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 HADHQ16836 314 aaKnown RBP11.61□□□□□ -0.55
ACTN4-206ENST00000489451 DCAF12Q5T6F0 453 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 NPNTQ6UXI9 565 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 B4GALNT4Q76KP1 1039 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 ADGRG6Q86SQ4 1221 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 PTRH1Q86Y79 214 aaKnown RBP11.61□□□□□ -0.55
ACTN4-206ENST00000489451 ZNF547Q8IVP9 402 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 RNF214Q8ND24 703 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 NCSTNQ92542 709 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 SLC45A3Q96JT2 553 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 OLFM3Q96PB7 478 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 RNF157Q96PX1 679 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 PLEKHG4BQ96PX9 1271 aa11.61□□□□□ -0.55
ACTN4-206ENST00000489451 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms