RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RPS9P46781 194 aaKnown RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 TAF10Q12962 218 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 DUSP4Q13115 394 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 KIAA1324Q6UXG2 1013 aaKnown RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 LINGO4Q6UY18 593 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 C12orf50Q8NA57 414 aaPredicted RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 TCF25Q9BQ70 676 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 MAP4K5Q9Y4K4 846 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 LRRC14BA6NHZ5 514 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 MGRN1O60291 552 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 UGT1A9O60656 530 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 PEX10O60683 326 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 AP2A2O94973 939 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 MT-CYBP00156 380 aaPredicted RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 FABP3P05413 133 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 ELFN1P0C7U0 828 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 YAP1P46937 504 aaKnown RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 ARF5P84085 180 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 CLCQ05315 142 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 IL18Q14116 193 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 LIN54Q6MZP7 749 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 AHSA2Q719I0 299 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 MAB21L3Q8N8X9 362 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 KLHL23Q8NBE8 558 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 RBM4BQ9BQ04 359 aaKnown RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 RBM4Q9BWF3 364 aaKnown RBP17.52■□□□□ 0.39
NPHP4-209ENST00000489180 IPPKQ9H8X2 491 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 UGT1A7Q9HAW7 530 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 UGT1A10Q9HAW8 530 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 UGT1A8Q9HAW9 530 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 NKIRAS2Q9NYR9 191 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 MBD2Q9UBB5 411 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF780BQ9Y6R6 833 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 PCBP1Q15365 356 aaKnown RBP eCLIP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ZBTB2Q8N680 514 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 RERGQ96A58 199 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 KLHL32Q96NJ5 620 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 FCRL4Q96PJ5 515 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 TRIT1Q9H3H1 467 aaKnown RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 TMEM165Q9HC07 324 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 E7ENX8 843 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ABLIM1O14639 778 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 SLC35G4P0C7Q5 338 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 HSPA7P48741 367 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ESRP1Q6NXG1 681 aaKnown RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 RPTNQ6XPR3 784 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 SLC35C2Q9NQQ7 365 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF180Q9UJW8 692 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 RAI2Q9Y5P3 530 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 NEDD8-MDP1E9PL57 170 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 PLIN3O60664 434 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ALOX5P09917 674 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 COL6A1P12109 1028 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 TP53INP1Q96A56 240 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 RACGAP1Q9H0H5 632 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ARHGEF4Q9NR80 690 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 PHF11Q9UIL8 331 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ELOVL7A1L3X0 281 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 BLMHQ13867 455 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 CIR1Q86X95 450 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 CLP1Q92989 425 aaKnown RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 TMEM109Q9BVC6 243 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 CD84Q9UIB8 345 aa17.51■□□□□ 0.39
NPHP4-209ENST00000489180 NOCTQ9UK39 431 aaKnown RBP17.51■□□□□ 0.39
NPHP4-209ENST00000489180 ECDO95905 644 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 RGS1Q08116 209 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ANKRD46Q86W74 232 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ARL10Q8N8L6 244 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 SCAIQ8N9R8 606 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ART5Q96L15 291 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 TEFMQ96QE5 360 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 RNF208Q9H0X6 261 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ATG10Q9H0Y0 220 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ING3Q9NXR8 418 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 NR2E3Q9Y5X4 410 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 C1QTNF3-AMACRE9PGA6 284 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 GTPBP1O00178 669 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 QSOX1O00391 747 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 PGRMC2O15173 223 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 HOXC6P09630 235 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 KIR3DL1P43629 444 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 CXorf57Q6NSI4 855 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF557Q8N988 423 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 PDZD7Q9H5P4 517 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 POLE3Q9NRF9 147 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 EVLQ9UI08 416 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 DERAQ9Y315 318 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 TCAF1Q9Y4C2 921 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 TRIM17Q9Y577 477 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 TULP2O00295 520 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF24P17028 368 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 PPIBP23284 216 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 FOXN2P32314 431 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 NDUFV1P49821 464 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ATXN1P54253 815 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 APOBEC3GQ9HC16 384 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms