RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 IGHV1OR21-1A0A087WYE8 117 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 SOWAHDA6NJG2 315 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 ATXN7O15265 892 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-213ENST00000489045 MTSS1O43312 755 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 FASLGP48023 281 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 MAPK10P53779 464 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 ZNF648Q5T619 568 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-213ENST00000489045 DAAM2Q86T65 1068 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 SFRP1Q8N474 314 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 TRAM1L1Q8N609 369 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 MRFAP1L1Q96HT8 127 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 QKIQ96PU8 341 aaKnown RBP eCLIP22.77■■□□□ 1.24
COL9A3-213ENST00000489045 PANX2Q96RD6 677 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 RBSNQ9H1K0 784 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 CARD9Q9H257 536 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 RAD18Q9NS91 495 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 KCNK4Q9NYG8 393 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 KLHL8Q9P2G9 620 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-213ENST00000489045 TBC1D29Q9UFV1 150 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 FAM153AQ9UHL3 310 aa22.77■■□□□ 1.24
COL9A3-213ENST00000489045 IGHV5-10-1A0A0J9YXX1 117 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 F5H423 210 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 NVLO15381 856 aaKnown RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 GRID2O43424 1007 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 NUAK1O60285 661 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 SLC25A14O95258 325 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 ZNF8P17098 575 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 CSF2RBP32927 897 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 VAC14Q08AM6 782 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 NOMO1Q15155 1222 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 KDELC1Q6UW63 502 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 ZNF761Q86XN6 746 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 RCBTB1Q8NDN9 531 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 CCDC74BQ96LY2 380 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 OR2AG1Q9H205 316 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 WDR70Q9NW82 654 aa22.76■■□□□ 1.23
COL9A3-213ENST00000489045 EPN1Q9Y6I3 576 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-213ENST00000489045 KALRNO60229 2985 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 PRAMEF33A0A0G2JMD5 474 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 RCCD1A6NED2 376 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 AURKAO14965 403 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 PRAMEF10O60809 474 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 NDUFA10O95299 355 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 BPIP17213 487 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 WNT3AP56704 352 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 PPP2R5EQ16537 467 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.75■■□□□ 1.23
COL9A3-213ENST00000489045 PDPK2PQ6A1A2 396 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 ZNF567Q8N184 647 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 HTR3CQ8WXA8 447 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 SLC39A7Q92504 469 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 GLYATL1Q969I3 302 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 SRPK1Q96SB4 655 aaKnown RBP22.75■■□□□ 1.23
COL9A3-213ENST00000489045 HEMGNQ9BXL5 484 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 AKAP7Q9P0M2 348 aaPredicted RBP22.75■■□□□ 1.23
COL9A3-213ENST00000489045 ACSL6Q9UKU0 697 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 ATMQ13315 3056 aa22.75■■□□□ 1.23
COL9A3-213ENST00000489045 LOC285095A0A1B0GVY8 99 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 HACD1B0YJ81 288 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 SNX2O60749 519 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 PRB1P04280 392 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 FECHP22830 423 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 LIMK2P53671 638 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 BBS12Q6ZW61 710 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 PID1Q7Z2X4 250 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 ADGRG6Q86SQ4 1221 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 TMTC1Q8IUR5 882 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 PHYKPLQ8IUZ5 450 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 OR4D9Q8NGE8 314 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 USP7Q93009 1102 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 VAT1Q99536 393 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 SLC38A3Q99624 504 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 HERPUD2Q9BSE4 406 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 ZMYND15Q9H091 742 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 TRIM39Q9HCM9 518 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 BPIFA1Q9NP55 256 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 FOXJ2Q9P0K8 574 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 ADGRG1Q9Y653 693 aa22.74■■□□□ 1.23
COL9A3-213ENST00000489045 A6NCN8 305 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 HGSO14964 777 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 CTNNA1P35221 906 aaKnown RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 GPLD1P80108 840 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 HHEXQ03014 270 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 CFHR1Q03591 330 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SQSTM1Q13501 440 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SIRPB2Q5JXA9 342 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 IYDQ6PHW0 289 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 CRTC3Q6UUV7 619 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 PCSK4Q6UW60 755 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 CCDC81Q6ZN84 652 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SLC25A41Q8N5S1 370 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SNRNP27Q8WVK2 155 aaKnown RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 OXNAD1Q96HP4 312 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 MRGPRX2Q96LB1 330 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 FCRL5Q96RD9 977 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 STN1Q9H668 368 aaKnown RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SARS2Q9NP81 518 aaKnown RBP22.73■■□□□ 1.23
COL9A3-213ENST00000489045 TMEM9Q9P0T7 183 aa22.73■■□□□ 1.23
COL9A3-213ENST00000489045 SDK2Q58EX2 2172 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 GPR89AB7ZAQ6 455 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms