RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 SPO11Q9Y5K1 396 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 PTPRQQ9UMZ3 2332 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 C9orf172C9J069 976 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 TK2O00142 265 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 EFSO43281 561 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 GRID2O43424 1007 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 NUAK1O60285 661 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 BPIP17213 487 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 WNT3AP56704 352 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 NFATC2Q13469 925 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 NOMO1Q15155 1222 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 TFDP3Q5H9I0 405 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 IYDQ6PHW0 289 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC81Q6ZN84 652 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 ZFAND4Q86XD8 727 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 SFRP1Q8N474 314 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 KRT35Q92764 455 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 AHCYL2Q96HN2 611 aaKnown RBP11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 CCNL2Q96S94 520 aaPredicted RBP11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC38A3Q99624 504 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 CARD9Q9H257 536 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 TRIM39Q9HCM9 518 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 FOXJ2Q9P0K8 574 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 AKAP7Q9P0M2 348 aaPredicted RBP11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 TMEM9Q9P0T7 183 aa11.81□□□□□ -0.52
CCHCR1-215ENST00000488920 KIF26BQ2KJY2 2108 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 hCG_1818297A0A087WSY0 165 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 RCCD1A6NED2 376 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 K7ENP7 123 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 MTX2O75431 263 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 NFKB1P19838 968 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 CSF2RBP32927 897 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 CYLC1P35663 651 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 FASLGP48023 281 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ZNF75DP51815 510 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 LIMK2P53671 638 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 DCDC1P59894 354 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 RHDQ02161 417 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 HHEXQ03014 270 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SRSF6Q13247 344 aaKnown RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SQSTM1Q13501 440 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC14A2Q15849 920 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 CLPPQ16740 277 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 KIAA1614Q5VZ46 1190 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 INO80CQ6PI98 192 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 CRTC3Q6UUV7 619 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 KDELC1Q6UW63 502 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 PID1Q7Z2X4 250 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ADGRG6Q86SQ4 1221 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 DAAM2Q86T65 1068 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ZNF567Q8N184 647 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC25A41Q8N5S1 370 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 TRAM1L1Q8N609 369 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 LSM14AQ8ND56 463 aaKnown RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 OR4D9Q8NGE8 314 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SNRNP27Q8WVK2 155 aaKnown RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 GLYATL1Q969I3 302 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ZSCAN5AQ9BUG6 496 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 C10orf88Q9H8K7 445 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 PRDM8Q9NQV8 689 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 KLHL8Q9P2G9 620 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC23A2Q9UGH3 650 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 FAM153AQ9UHL3 310 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 ACSL6Q9UKU0 697 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 EPN1Q9Y6I3 576 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 DUSP10Q9Y6W6 482 aa11.8□□□□□ -0.52
CCHCR1-215ENST00000488920 LOC285095A0A1B0GVY8 99 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 A6NCN8 305 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 SOWAHDA6NJG2 315 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 A8MU76 341 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 ERVH48-1M5A8F1 160 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 HGSO14964 777 aaPredicted RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 MTSS1O43312 755 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 C1QL1O75973 258 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 FGF3P11487 239 aaPredicted RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 CHRNA4P43681 627 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 GPLD1P80108 840 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 C19orf57Q0VDD7 668 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 SIRPB2Q5JXA9 342 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 SNAP47Q5SQN1 464 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 TMEM164Q5U3C3 297 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 C11orf63Q6NUN7 778 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 TMEM71Q6P5X7 295 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 PHYKPLQ8IUZ5 450 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 OR10G6Q8NH81 332 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 HTR3CQ8WXA8 447 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms