RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PCDH20Q8N6Y1 951 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 CCDC89Q8N998 374 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 POC5Q8NA72 575 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 ZNF114Q8NC26 417 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CLEC18CQ8NCF0 446 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 FAM216AQ8WUB2 273 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 WBP1Q96G27 269 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 MTERF1Q99551 399 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 MMTAG2Q9BU76 263 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 SEZ6LQ9BYH1 1024 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 SPRY4Q9C004 299 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PDE7BQ9NP56 450 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PLSCR4Q9NRQ2 329 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 WNT16Q9UBV4 365 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 TMEM5Q9Y2B1 443 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CMAHPQ9Y471 501 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CKAP5Q14008 2032 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PDS5AQ29RF7 1337 aaKnown RBP3.21□□□□□ -1.89
CD46-215ENST00000488596 OR2A25A4D2G3 310 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 SRRM3A6NNA2 597 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 OGG1O15527 345 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 SPINT2O43291 252 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 FIBPO43427 364 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 ENTPD3O75355 529 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 DDNO94850 711 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 STARD3NLO95772 234 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 PLGP00747 810 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 AFPP02771 609 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 IGHV4-30-4P0DP06 118 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 SRCP12931 536 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 AKR1B1P15121 316 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 UBA1P22314 1058 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 PON1P27169 355 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 HOXC9P31274 260 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 MSH2P43246 934 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 GAS1P54826 345 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 IFI35P80217 286 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 MRPS5P82675 430 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 MRPS34P82930 218 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 ZBED6P86452 979 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 TFAP4Q01664 338 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 ZNF155Q12901 538 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 EPS8Q12929 822 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 OASLQ15646 514 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 HLFQ16534 295 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 DCST1Q5T197 706 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 BRINP3Q76B58 766 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 TSPAN33Q86UF1 283 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 LINC00346Q8IVM7 164 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 SCML4Q8N228 414 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 RASGEF1CQ8N431 466 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 ACVR1CQ8NER5 493 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 DUSP19Q8WTR2 217 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 TANKQ92844 425 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 MTBPQ96DY7 904 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 PHF21BQ96EK2 531 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 FIZ1Q96SL8 496 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 IL25Q9H293 177 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 EPB41L5Q9HCM4 733 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 ANKEF1Q9NU02 776 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 ERRFI1Q9UJM3 462 aaPredicted RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 ACSL5Q9ULC5 683 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 PADI3Q9ULW8 664 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 KLHL20Q9Y2M5 609 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 PTRH2Q9Y3E5 179 aaKnown RBP3.21□□□□□ -1.9
CD46-215ENST00000488596 RABGAP1Q9Y3P9 1069 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 LOXL2Q9Y4K0 774 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 NFS1Q9Y697 457 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 TAF1P21675 1872 aa3.21□□□□□ -1.9
CD46-215ENST00000488596 CDRT15L2A8MXV6 281 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 MID1O15344 667 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 ERAL1O75616 437 aaKnown RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 ZNF432O94892 652 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 PGM3O95394 542 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 ZBTB11O95625 1053 aaPredicted RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 MMP9P14780 707 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 RRM1P23921 792 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 HOXA13P31271 388 aaPredicted RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 APOBEC1P41238 236 aaKnown RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 RAD52P43351 418 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SLC15A1P46059 708 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 NRIP1P48552 1158 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 CLCNKAP51800 687 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 TAS2R38P59533 333 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 PDE1BQ01064 536 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SREBF2Q12772 1141 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 TRAF2Q12933 501 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 MAD2L1Q13257 205 aaPredicted RBP3.2□□□□□ -1.9
CD46-215ENST00000488596 KCTD2Q14681 263 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SF3B4Q15427 424 aaKnown RBP eCLIP3.2□□□□□ -1.94e-12■■■■■ 46.3
CD46-215ENST00000488596 PCGF3Q3KNV8 242 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 ATP13A5Q4VNC0 1218 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 IGSF11Q5DX21 431 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 MFSD4BQ5TF39 518 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 C18orf63Q68DL7 685 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 KRBA2Q6ZNG9 492 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 GALNT5Q7Z7M9 940 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms