RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 BRD4O60885 1362 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SSH2Q76I76 1423 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 PIEZO1Q92508 2521 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 ITSN1Q15811 1721 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 TIAM2Q8IVF5 1701 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 KIF13BQ9NQT8 1826 aa4.35□□□□□ -1.71
ITGB1-214ENST00000488427 SAA2-SAA4A0A096LPE2 208 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 GTPBP1O00178 669 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 EPB41L2O43491 1005 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 ZBTB11O95625 1053 aaPredicted RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 SNRNP70P08621 437 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 SPARCP09486 303 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 ZNF12P17014 697 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 HOXC9P31274 260 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 USP8P40818 1118 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 FASLGP48023 281 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 TERF1P54274 439 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 BNC1Q01954 994 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 DDR1Q08345 913 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 TROAPQ12815 778 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 DLG1Q12959 904 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 SF3B4Q15427 424 aaKnown RBP eCLIP4.34□□□□□ -1.712e-6■■■■■ 34.4
ITGB1-214ENST00000488427 FAM69BQ5VUD6 431 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 FAAH2Q6GMR7 532 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 WBP2NLQ6ICG8 309 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 TRNP1Q6NT89 227 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 TSSK4Q6SA08 328 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 UNQ6126/PRO20091Q6UXV3 157 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 MTSS1LQ765P7 747 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 CPLX4Q7Z7G2 160 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 RBM23Q86U06 439 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 SLC35F3Q8IY50 421 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 DCP1BQ8IZD4 617 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 TEX19Q8NA77 164 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 LILRB1Q8NHL6 650 aaPredicted RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 POMGNT1Q8WZA1 660 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 FAM122AQ96E09 287 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 FEM1CQ96JP0 617 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 STRA6Q9BX79 667 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 VPS33BQ9H267 617 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 RETREG1Q9H6L5 497 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 DDX31Q9H8H2 851 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 EHD2Q9NZN4 543 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 UBA2Q9UBT2 640 aaPredicted RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 MALT1Q9UDY8 824 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 LIMA1Q9UHB6 759 aaKnown RBP4.34□□□□□ -1.71
ITGB1-214ENST00000488427 AMDHD2Q9Y303 409 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 COL18A1P39060 1754 aa4.34□□□□□ -1.71
ITGB1-214ENST00000488427 UNC80Q8N2C7 3258 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 KIAA1551Q9HCM1 1747 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 J3KR12 359 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 J3KRW8 73 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 PLRG1O43660 514 aaKnown RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 LDB3O75112 727 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 NDUFS7O75251 213 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 NDUFS3O75489 264 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SLC25A12O75746 678 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 KRT36O76013 467 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 CDH2P19022 906 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 MCM3P25205 808 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 ITGB8P26012 769 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 COMPP49747 757 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 TUBP50607 506 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 EEF1A1P68104 462 aaKnown RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 CSNK2A1P68400 391 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-214ENST00000488427 FOXM1Q08050 763 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 TRAF3Q13114 568 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 FGFBP1Q14512 234 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 MYLK3Q32MK0 819 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SGO1Q5FBB7 561 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 EEF1A1P5Q5VTE0 462 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 FRG2Q64ET8 278 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SLC36A4Q6YBV0 504 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 B3GNT6Q6ZMB0 384 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 NOXA1Q86UR1 476 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 HACE1Q8IYU2 909 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 PGBD5Q8N414 524 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SPATA6LQ8N4H0 392 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 ZNF114Q8NC26 417 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 CSNK2A3Q8NEV1 391 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 TANKQ92844 425 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 C3orf30Q96M34 536 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 NCAPGQ9BPX3 1015 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SIL1Q9H173 461 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 IL25Q9H293 177 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 FKRPQ9H9S5 495 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 KIF9Q9HAQ2 790 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 SLC9A2Q9UBY0 812 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 POU2F3Q9UKI9 436 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 ICAM5Q9UMF0 924 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 PROCRQ9UNN8 238 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 CEPT1Q9Y6K0 416 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 MAU2Q9Y6X3 613 aa4.33□□□□□ -1.72
ITGB1-214ENST00000488427 QRICH2Q9H0J4 1663 aa4.32□□□□□ -1.72
ITGB1-214ENST00000488427 CLTCL1P53675 1640 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms