RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CSF2RBP32927 897 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 CDKN2BP42772 138 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 MAPK9P45984 424 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 GPR3P46089 330 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 LIMK2P53671 638 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 C19orf57Q0VDD7 668 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 NFATC2Q13469 925 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 PEX6Q13608 980 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 CRTC3Q6UUV7 619 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 VASH2Q86V25 355 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 VSIG1Q86XK7 387 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 CCDC50Q8IVM0 306 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC25A41Q8N5S1 370 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 PMEPA1Q969W9 287 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 AHCYL2Q96HN2 611 aaKnown RBP11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 CCNL2Q96S94 520 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 OSGEPL1Q9H4B0 414 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 C10orf88Q9H8K7 445 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 AKAP7Q9P0M2 348 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 VPS18Q9P253 973 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 TBC1D29Q9UFV1 150 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 SPO11Q9Y5K1 396 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 K7ENP7 123 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 NVLO15381 856 aaKnown RBP11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 ZW10O43264 779 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 NUAK1O60285 661 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 LIPCP11150 499 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 BPIP17213 487 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 NFKB1P19838 968 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 CD68P34810 354 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 RHDQ02161 417 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 HHEXQ03014 270 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 TFDP2Q14188 446 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 NR1D2Q14995 579 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF569Q5MCW4 686 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 MANEAQ5SRI9 462 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 INO80CQ6PI98 192 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 TMC3Q7Z5M5 1100 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 FAM129CQ86XR2 697 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 SFRP1Q8N474 314 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 KRT35Q92764 455 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 TMEM159Q96B96 161 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 TEKT5Q96M29 485 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 MAGEE1Q9HCI5 957 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 PRDM8Q9NQV8 689 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 KLC4Q9NSK0 619 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 OCIAD1Q9NX40 245 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 KLHL8Q9P2G9 620 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
NIPAL3-207ENST00000488155 SNRNP200O75643 2136 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 RGSL1A5PLK6 1076 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TK2O00142 265 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 BUD23O43709 281 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 NDST3O95803 873 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 FGF3P11487 239 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 CSTF2P33240 577 aaKnown RBP eCLIP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 CHRNA4P43681 627 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 FASLGP48023 281 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 WNT3AP56704 352 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 WASHC5Q12768 1159 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 LRP8Q14114 963 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 PRKD1Q15139 912 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TCEAL1Q15170 157 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 SPA17Q15506 151 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 SEPT7Q16181 437 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TMEM164Q5U3C3 297 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 IYDQ6PHW0 289 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 PID1Q7Z2X4 250 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 ADGRG6Q86SQ4 1221 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF843Q8N446 348 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TRAM1L1Q8N609 369 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 OR10G6Q8NH81 332 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 NCSTNQ92542 709 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TTC9Q92623 222 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 P3H4Q92791 437 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 ART4Q93070 314 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 GLYATL1Q969I3 302 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TADA1Q96BN2 335 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 RNF31Q96EP0 1072 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 ZSCAN5AQ9BUG6 496 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TBC1D10AQ9BXI6 508 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 CARD9Q9H257 536 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 RMI1Q9H9A7 625 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TRIM39Q9HCM9 518 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 TRIM10Q9UDY6 481 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC23A2Q9UGH3 650 aa11.17□□□□□ -0.62
NIPAL3-207ENST00000488155 FAM153AQ9UHL3 310 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms