RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MAD2L1Q13257 205 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 TNFAIP1Q13829 316 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 OASLQ15646 514 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 PNLIPRP3Q17RR3 467 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 PLEKHS1Q5SXH7 462 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 DCST1Q5T197 706 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 LRIF1Q5T3J3 769 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ACSM2BQ68CK6 577 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF324BQ6AW86 544 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 KIAA1161Q6NSJ0 714 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 FAM122CQ6P4D5 195 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CHST9Q7L1S5 443 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 HACE1Q8IYU2 909 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 RNF168Q8IYW5 571 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 PCDH20Q8N6Y1 951 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 OR2AK2Q8NG84 335 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 OR8K5Q8NH50 307 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 MAGEC3Q8TD91 643 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 TANKQ92844 425 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 APBB2Q92870 758 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ELMOD3Q96FG2 381 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 FEM1CQ96JP0 617 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CMKLR1Q99788 373 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 SEBOXQ9HB31 216 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CD93Q9NPY3 652 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 SMARCAL1Q9NZC9 954 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 OR14J1Q9UGF5 321 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 POLG2Q9UHN1 485 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 SIX4Q9UIU6 781 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ZHX1Q9UKY1 873 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF215Q9UL58 517 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 NOL7Q9UMY1 257 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC7Q96M83 1385 aa3.84□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC18Q5T9S5 1454 aa3.84□□□□□ -1.8
ECHDC1-217ENST00000488087 PLEKHH2Q8IVE3 1493 aa3.84□□□□□ -1.8
ECHDC1-217ENST00000488087 ARAP1Q96P48 1450 aa3.84□□□□□ -1.8
ECHDC1-217ENST00000488087 SCRIBQ14160 1630 aa3.84□□□□□ -1.8
ECHDC1-217ENST00000488087 PLSCR5A0PG75 271 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 GOLGA6L9A6NEM1 432 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 A8MZ25 164 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PROB1E7EW31 1015 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 M0QZ24 198 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 FIBPO43427 364 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 HS6ST1O60243 411 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 RB1P06400 928 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 HSP90AB1P08238 724 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CSH1P0DML2 217 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CSH2P0DML3 217 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 NLRP5P59047 1200 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 TAS2R40P59535 323 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 MRPS34P82930 218 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 HMGN5P82970 282 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PDE1BQ01064 536 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 POU5F1Q01860 360 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 KIF5AQ12840 1032 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF155Q12901 538 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CDC16Q13042 620 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 IKQ13123 557 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 SNTA1Q13424 505 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 KEAP1Q14145 624 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 ASIC2Q16515 512 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 DUSP28Q4G0W2 176 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 SETMARQ53H47 684 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 FRG2Q64ET8 278 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CTR9Q6PD62 1173 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 TAGAPQ8N103 731 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 SRBD1Q8N5C6 995 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 LILRB1Q8NHL6 650 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 MOAP1Q96BY2 351 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CALML4Q96GE6 196 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 TMEM19Q96HH6 336 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 MTERF1Q99551 399 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 SEPT5Q99719 369 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PANK2Q9BZ23 570 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PIGMQ9H3S5 423 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 SETD4Q9NVD3 440 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 MCM9Q9NXL9 1143 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF224Q9NZL3 707 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 C1RLQ9NZP8 487 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 COPG2Q9UBF2 871 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 STK39Q9UEW8 545 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 ADD3Q9UEY8 706 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 FBXW11Q9UKB1 542 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 KCNS2Q9ULS6 477 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 VDAC3Q9Y277 283 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 PCDHGB1Q9Y5G3 927 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 TONSLQ96HA7 1378 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 MROH2BQ7Z745 1585 aa3.83□□□□□ -1.8
ECHDC1-217ENST00000488087 UHRF1BP1LA0JNW5 1464 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 NLRP1Q9C000 1473 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 UACAQ9BZF9 1416 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 YEATS2Q9ULM3 1422 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 UQCRHLA0A096LP55 91 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 A0A0G2JPF8 293 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms