RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 WDR74Q6RFH5 385 aaPredicted RBP12.07□□□□□ -0.48
VPS16-208ENST00000487461 NPNTQ6UXI9 565 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ARHGAP22Q7Z5H3 698 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 FAM129CQ86XR2 697 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 BMPERQ8N8U9 685 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 GPR26Q8NDV2 337 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 OR8K1Q8NGG5 319 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 OR10G6Q8NH81 332 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 NCSTNQ92542 709 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
VPS16-208ENST00000487461 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
VPS16-208ENST00000487461 DNAJC7Q99615 494 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 CHP1Q99653 195 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 DDA1Q9BW61 102 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ADGRE3Q9BY15 652 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SARS2Q9NP81 518 aaKnown RBP12.07□□□□□ -0.48
VPS16-208ENST00000487461 PRDM8Q9NQV8 689 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 STARD5Q9NSY2 213 aa12.07□□□□□ -0.48
VPS16-208ENST00000487461 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 ZNF487B1APH4 448 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 APOL1O14791 398 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 DUX1O43812 170 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 PIRTP0C851 137 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
VPS16-208ENST00000487461 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 CLCA4Q14CN2 919 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 DCAF12Q5T6F0 453 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 ADGRG6Q86SQ4 1221 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SLC9B2Q86UD5 537 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 NT5DC3Q86UY8 548 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 CACNA2D3Q8IZS8 1091 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 CCDC112Q8NEF3 446 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 TADA1Q96BN2 335 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 HERPUD2Q9BSE4 406 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SPATA16Q9BXB7 569 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
VPS16-208ENST00000487461 ASPSCR1Q9BZE9 553 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 OR2AG1Q9H205 316 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 CARD9Q9H257 536 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 MAGEE1Q9HCI5 957 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 TRIM39Q9HCM9 518 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
VPS16-208ENST00000487461 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SLC23A2Q9UGH3 650 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 SHOC2Q9UQ13 582 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
VPS16-208ENST00000487461 KIR2DS5A0A0G2JLQ3 304 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 A0A0G2JNG1 304 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 KIR2DS3K7RE56 304 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 AKR1B10O60218 316 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 RAD1O60671 282 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 SLC25A14O95258 325 aaPredicted RBP12.05□□□□□ -0.48
VPS16-208ENST00000487461 F3P13726 295 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 LIFP15018 202 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 CLCNKAP51800 687 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 NFKB2Q00653 900 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 MC2RQ01718 297 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 CDK18Q07002 472 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 KIR2DS5Q14953 304 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 PDK1Q15118 436 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 ALS2CLQ60I27 953 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 PRICKLE2Q7Z3G6 844 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 IL22RA1Q8N6P7 574 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 SPATA22Q8NHS9 363 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
VPS16-208ENST00000487461 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
VPS16-208ENST00000487461 RTP4Q96DX8 246 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 OLFM3Q96PB7 478 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 PLEKHG4BQ96PX9 1271 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 CTRCQ99895 268 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 SLC25A51Q9H1U9 297 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 KLC4Q9NSK0 619 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 SPTLC3Q9NUV7 552 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 PILRAQ9UKJ1 303 aa12.05□□□□□ -0.48
VPS16-208ENST00000487461 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
VPS16-208ENST00000487461 TENM4Q6N022 2769 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 OR5K4A6NMS3 321 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 AURKAO14965 403 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 CHUKO15111 745 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 MTA2O94776 668 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 WISP1O95388 367 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 MT-CYBP00156 380 aaPredicted RBP12.04□□□□□ -0.48
VPS16-208ENST00000487461 TPM3P06753 285 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 SFTPCP11686 197 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 BPIP17213 487 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 MAPK9P45984 424 aa12.04□□□□□ -0.48
VPS16-208ENST00000487461 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms