RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PNLIPRP2P54317 469 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 RRP1P56182 461 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 CSNK2A1P68400 391 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ABATP80404 500 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 DSC1Q08554 894 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 Q0VFX4 171 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 SREBF2Q12772 1141 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KCNC3Q14003 757 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KRT71Q3SY84 523 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 TDRD12Q587J7 1177 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ZNF805Q5CZA5 627 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 EFHC1Q5JVL4 640 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 C8orf82Q6P1X6 216 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KCTD18Q6PI47 426 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 SLC36A4Q6YBV0 504 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KRT74Q7RTS7 529 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ADGRA1Q86SQ6 560 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 SDCCAG8Q86SQ7 713 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KBTBD6Q86V97 674 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 TICAM2Q86XR7 235 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 LINC00346Q8IVM7 164 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ARID3BQ8IVW6 561 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 FOXRED2Q8IWF2 684 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 MCEMP1Q8IX19 187 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 FBXL14Q8N1E6 418 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 NEXN-AS1Q8NBZ9 246 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 CSNK2A3Q8NEV1 391 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 OR14A16Q8NHC5 309 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 PRPF31Q8WWY3 499 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 LRRC59Q96AG4 307 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 MED30Q96HR3 178 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 NUDCD1Q96RS6 583 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KXD1Q9BQD3 176 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 PIGMQ9H3S5 423 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 EPB41L5Q9HCM4 733 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 WSB2Q9NYS7 404 aaPredicted RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 ACSL5Q9ULC5 683 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 PCDHA7Q9UN72 937 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 PTRH2Q9Y3E5 179 aaKnown RBP3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
SNRNP27-204ENST00000487029 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 A0A1W2PR77 199 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 CPED1A4D0V7 1026 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 GLOD5A6NK44 160 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 M0QZ24 198 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 MAP2K7O14733 419 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SMAD9O15198 467 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 ADAM20O43506 726 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 PLRG1O43660 514 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SERPINI2O75830 405 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 CSPG5O95196 566 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 DNTTP04053 509 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 ICAM1P05362 532 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 RRM1P23921 792 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 MSH2P43246 934 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 FASLGP48023 281 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 LMAN1P49257 510 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 STAT2P52630 851 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 HNRNPH2P55795 449 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 LTBQ06643 244 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 GRSF1Q12849 480 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 MAD2L1Q13257 205 aaPredicted RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 CTF1Q16619 201 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 C15orf59Q2T9L4 293 aaPredicted RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 AMZ1Q400G9 498 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 BMP2KLQ5H9B9 411 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 DCST1Q5T197 706 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 GARNL3Q5VVW2 1013 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 FRG2Q64ET8 278 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 TMEM198Q66K66 360 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 NAA16Q6N069 864 aaPredicted RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SLC30A6Q6NXT4 461 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 DUS1LQ6P1R4 473 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 DNAAF5Q86Y56 855 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SCYL3Q8IZE3 742 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 BEST3Q8N1M1 668 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 IQCF1Q8N6M8 205 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 OR1J2Q8NGS2 313 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 LMO3Q8TAP4 145 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 ADAMTS14Q8WXS8 1223 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 RND1Q92730 232 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 APBB2Q92870 758 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 GRAMD2BQ96HH9 432 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 FIZ1Q96SL8 496 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 NTPCRQ9BSD7 190 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SLC25A33Q9BSK2 321 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 KIFC3Q9BVG8 833 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 MRPL1Q9BYD6 325 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 TXLNGYQ9BZA5 131 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SIL1Q9H173 461 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 OSGEPL1Q9H4B0 414 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 SEBOXQ9HB31 216 aaPredicted RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 PAG1Q9NWQ8 432 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 ARHGEF38Q9NXL2 777 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 PSD3Q9NYI0 1048 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 MARCH4Q9P2E8 410 aaPredicted RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 CPSF2Q9P2I0 782 aaKnown RBP3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 STK39Q9UEW8 545 aa3.52□□□□□ -1.85
SNRNP27-204ENST00000487029 TINAGQ9UJW2 476 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms