RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	TNFSF9	P41273	254 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MATR3	P43243	847 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MCM2	P49736	904 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	LIG4	P49917	911 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ZNF131	P52739	623 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SLC12A3	P55017	1021 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SHC2	P98077	582 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ID2	Q02363	134 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SRSF5	Q13243	272 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	RUNX3	Q13761	415 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	VEPH1	Q14D04	833 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ZRSR1	Q15695	479 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TAF12	Q16514	161 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	RILPL1	Q5EBL4	403 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TMEM196	Q5HYL7	178 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	C9orf57	Q5W0N0	161 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	IL31	Q6EBC2	164 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	METTL23	Q86XA0	190 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	DENND1C	Q8IV53	801 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CMTM8	Q8IZV2	173 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	THEM5	Q8N1Q8	247 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	OR10T2	Q8NGX3	314 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TTC8	Q8TAM2	541 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SLC35G2	Q8TBE7	412 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SPPL2B	Q8TCT7	592 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	EXOC4	Q96A65	974 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	BICD1	Q96G01	975 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ZFYVE19	Q96K21	471 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TAAR9	Q96RI9	348 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CCSER1	Q9C0I3	900 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ZCWPW1	Q9H0M4	648 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ARRDC1-AS1	Q9H2J1	176 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ASB7	Q9H672	318 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	GKN1	Q9NS71	199 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MGAT4C	Q9UBM8	478 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CPSF3	Q9UKF6	684 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ANGPTL2	Q9UKU9	493 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ODF2L	Q9ULJ1	636 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TBX20	Q9UMR3	447 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	C2CD2	Q9Y426	696 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PCDHGA5	Q9Y5G8	931 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CACNA1E	Q15878	2313 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PTPRD	P23468	1912 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CEP192	Q8TEP8	1941 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	KIAA1549L	Q6ZVL6	1849 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	FASN	P49327	2511 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	VWA3A	A6NCI4	1184 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941		H3BNX3	289 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CLIC1	O00299	241 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CYB561D2	O14569	222 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	RRH	O14718	337 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CD3EAP	O15446	510 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CCDC192	P0DO97	292 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	HMGA1	P17096	107 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ATF6	P18850	670 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	DRD1	P21728	446 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	HOXC13	P31276	330 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	AVPR1A	P37288	418 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ME1	P48163	572 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TAF6	P49848	677 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SUMO2	P61956	95 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	GTF2B	Q00403	316 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CFHR3	Q02985	330 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	FHL3	Q13643	280 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TMEM132D	Q14C87	1099 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PDGFRL	Q15198	375 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SF3A2	Q15428	464 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	NFE2	Q16621	373 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PLK5	Q496M5	336 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	FBXO43	Q4G163	708 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	AASDH	Q4L235	1098 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SLC39A12	Q504Y0	691 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	STPG1	Q5TH74	334 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ADAL	Q6DHV7	355 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	JADE1	Q6IE81	842 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SLC39A4	Q6P5W5	647 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	OVCH2	Q7RTZ1	564 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TMEM150A	Q86TG1	271 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	KBTBD6	Q86V97	674 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MON1A	Q86VX9	555 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	DCP1B	Q8IZD4	617 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SPART	Q8N0X7	666 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MYCT1	Q8N699	235 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	OR6B3	Q8NGW1	331 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CCDC26	Q8TAB7	109 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	USP13	Q92995	863 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	CALML4	Q96GE6	196 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	LYZL4	Q96KX0	146 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	AK8	Q96MA6	479 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	GCNA	Q96QF7	691 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PLIN2	Q99541	437 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SEPT5	Q99719	369 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	REEP2	Q9BRK0	252 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PYM1	Q9BRP8	204 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	MSTO1	Q9BUK6	570 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TM2D2	Q9BX73	214 aa		4.2	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ST6GALNAC4	Q9H4F1	302 aa		4.2	□□□□□ -1.74

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