RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CAMK1DQ8IU85 385 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 TGIF2LYQ8IUE0 185 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 PPM1KQ8N3J5 372 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 ACBD4Q8NC06 268 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 ZNF397Q8NF99 534 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 LMO3Q8TAP4 145 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 FAR1Q8WVX9 515 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 ZNF606Q8WXB4 792 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 CASKIN2Q8WXE0 1202 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 SLC35C1Q96A29 364 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 SH3KBP1Q96B97 665 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 PAGE5Q96GU1 130 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 ZNF641Q96N77 438 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 NT5C1BQ96P26 610 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 FCRL4Q96PJ5 515 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 KLC2Q9H0B6 622 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 MAGEH1Q9H213 219 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 ZNF552Q9H707 407 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 FGF21Q9NSA1 209 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 PPP4R2Q9NY27 417 aa8.15□□□□□ -1.1
XRN1-212ENST00000486211 AJAP1Q9UKB5 411 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 PCYT1BQ9Y5K3 369 aaPredicted RBP8.15□□□□□ -1.1
XRN1-212ENST00000486211 PRRC2AP48634 2157 aaKnown RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 KIAA1324LA8MWY0 1029 aaPredicted RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 BUB1O43683 1085 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 KIF1CO43896 1103 aaKnown RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 CUTAO60888 179 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 ERBB2P04626 1255 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 KLK2P20151 261 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 AMPD1P23109 780 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TEAD1P28347 426 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 SULT1E1P49888 294 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 RRADP55042 308 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 DEUP1Q05D60 604 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 GPS2Q13227 327 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 MYBPC3Q14896 1274 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 ACOX1Q15067 660 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 CYTH1Q15438 398 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TCERG1LQ5VWI1 586 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 HGSNATQ68CP4 663 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 LCN10Q6JVE6 187 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 C11orf57Q6ZUT1 292 aaPredicted RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 RRAGAQ7L523 313 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 BNIPLQ7Z465 357 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 DNAAF5Q86Y56 855 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 ARHGEF19Q8IW93 802 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 ECHDC3Q96DC8 303 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 NUS1Q96E22 293 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 KREMEN1Q96MU8 473 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TGM7Q96PF1 710 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TRAPPC9Q96Q05 1148 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TBCBQ99426 244 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 CHST8Q9H2A9 424 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 ACP6Q9NPH0 428 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TMEM248Q9NWD8 314 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TBC1D29Q9UFV1 150 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 DNAI1Q9UI46 699 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 TCFL5Q9UL49 500 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 RPH3AQ9Y2J0 694 aaPredicted RBP8.14□□□□□ -1.11
XRN1-212ENST00000486211 SLC30A1Q9Y6M5 507 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
XRN1-212ENST00000486211 A0A0U1RQS6 177 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 A0A1W2PQJ5 194 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 A8MX80 341 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 RAMP2O60895 175 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 LETM1O95202 739 aaPredicted RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 SOD1P00441 154 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 ALPPP05187 535 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 CAPN1P07384 714 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 RAB40ALP0C0E4 278 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 FOLR1P15328 257 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 NELFEP18615 380 aaKnown RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 TSFMP43897 325 aaKnown RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 KCNK10P57789 538 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 UBE2IP63279 158 aaKnown RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 SLC6A3Q01959 620 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 GCNT1Q02742 428 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 TUBB3Q13509 450 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 LRP8Q14114 963 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 GRM3Q14832 879 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 CDSNQ15517 529 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 KYNUQ16719 465 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 DOK6Q6PKX4 331 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 RPTNQ6XPR3 784 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 ZNF765Q7L2R6 523 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 SLC9B2Q86UD5 537 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 ZADH2Q8N4Q0 377 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms