RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 WDR26Q9H7D7 661 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 RAB6BQ9NRW1 208 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 PIEZO2Q9H5I5 2752 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GOLGA6BA6NDN3 693 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 PDE2AO00408 941 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 GAPDHSO14556 408 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 SDC3O75056 442 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 PIAS2O75928 621 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GRIA1P42261 906 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 GPR1P46091 355 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 FNTAP49354 379 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 PCBP4P57723 403 aaKnown RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GLT6D1Q7Z4J2 308 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 PHACTR4Q8IZ21 702 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 CACTIN-AS1Q8N1I8 211 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 COX14Q96I36 57 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 FRMD8Q9BZ67 464 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 TRIM4Q9C037 500 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 FAM83DQ9H4H8 585 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 EIF2B3Q9NR50 452 aaKnown RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 UCKL1Q9NWZ5 548 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 CLCA2Q9UQC9 943 aa12.82□□□□□ -0.36
SSR4-211ENST00000486204 HEMK1Q9Y5R4 338 aaPredicted RBP12.82□□□□□ -0.36
SSR4-211ENST00000486204 UNC79Q9P2D8 2635 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 CACNB4O00305 520 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 PSMD3O43242 534 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 LDB2O43679 373 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 FUCA1P04066 466 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 DGKAP23743 735 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 HTR1BP28222 390 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 ZNF140P52738 457 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 VAC14Q08AM6 782 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 PTPRCAPQ14761 206 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 TAF1AQ15573 450 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 ENPP7Q6UWV6 458 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 GSTA5Q7RTV2 222 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 TRIM74Q86UV6 250 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 SLC25A45Q8N413 288 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 EID2Q8N6I1 236 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 OR56A4Q8NGH8 313 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 OR52K1Q8NGK4 314 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 OR1E3Q8WZA6 343 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 TSACCQ96A04 125 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 FAM117AQ9C073 453 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 CDH19Q9H159 772 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 BPIFA1Q9NP55 256 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 MRPL40Q9NQ50 206 aaKnown RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 CASS4Q9NQ75 786 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 PHPT1Q9NRX4 125 aaPredicted RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 PIH1D1Q9NWS0 290 aaKnown RBP12.81□□□□□ -0.36
SSR4-211ENST00000486204 TMPRSS11EQ9UL52 423 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 ARL5AQ9Y689 179 aa12.81□□□□□ -0.36
SSR4-211ENST00000486204 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.8□□□□□ -0.36
SSR4-211ENST00000486204 TNFRSF10CO14798 259 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 KRT14P02533 472 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 CEACAM5P06731 702 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 PYGLP06737 847 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 APRTP07741 180 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 JUNDP17535 347 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 KELP23276 732 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 CA5AP35218 305 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 MAGEA6P43360 314 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 HK3P52790 923 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 HNRNPKP61978 463 aaKnown RBP eCLIP12.8□□□□□ -0.36
SSR4-211ENST00000486204 BASP1P80723 227 aaKnown RBP12.8□□□□□ -0.36
SSR4-211ENST00000486204 PPARDQ03181 441 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 KCNJ11Q14654 390 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 TRIP13Q15645 432 aaPredicted RBP12.8□□□□□ -0.36
SSR4-211ENST00000486204 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 LINC00523Q86TU6 105 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 TRAM1L1Q8N609 369 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
SSR4-211ENST00000486204 SLCO2A1Q92959 643 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 LRRC45Q96CN5 670 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 HIC2Q96JB3 615 aa12.8□□□□□ -0.36
SSR4-211ENST00000486204 TBATAQ96M53 351 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms