RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 B3GNT8Q7Z7M8 397 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 MCUQ8NE86 351 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 CPT1BQ92523 772 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 LRRC39Q96DD0 335 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 OLFM3Q96PB7 478 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 DEPDC7Q96QD5 511 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 LGMNQ99538 433 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 BOCQ9BWV1 1114 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SEMA4CQ9C0C4 833 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ABCG4Q9H172 646 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 PDFQ9HBH1 243 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 MRPL40Q9NQ50 206 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 NINJ2Q9NZG7 142 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 SAE1Q9UBE0 346 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 OR1A2Q9Y585 309 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 HEY1Q9Y5J3 304 aa9.39□□□□□ -0.91
TMEM39A-208ENST00000486159 NEMP2A6NFY4 417 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 E7EVH7 732 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 FGF10O15520 208 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 KCNN4O15554 427 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CDH16O75309 829 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 IGSF6O95976 241 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 PCCBP05166 539 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ZSCAN5DPP0CG00 497 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ALPPL2P10696 532 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ETS1P14921 441 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 GM2AP17900 193 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TPSB2P20231 275 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 AMPD1P23109 780 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 LSSP48449 732 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 PAPOLAP51003 745 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 GDF10P55107 478 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TPI1P60174 286 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 KCNJ11Q14654 390 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 PRKD1Q15139 912 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 NR0B2Q15466 257 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TPSAB1Q15661 275 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ALG11Q2TAA5 492 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 DNAJC21Q5F1R6 531 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TNFAIP8L3Q5GJ75 292 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 NPNTQ6UXI9 565 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ZC3H18Q86VM9 953 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 TDRPQ86YL5 185 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 LRRC49Q8IUZ0 686 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 HID1Q8IV36 788 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 LZTR1Q8N653 840 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 NPWQ8N729 165 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 GLIS1Q8NBF1 620 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 KYQ8NBH2 561 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CCL4L1Q8NHW4 92 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CXorf40AQ8TE69 158 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ASB12Q8WXK4 309 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 RAB7BQ96AH8 199 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 VAT1Q99536 393 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 IL12RB2Q99665 862 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CCDC3Q9BQI4 270 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 DUSP23Q9BVJ7 150 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CAPS2Q9BXY5 557 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 SYNDIG1Q9H7V2 258 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 POLR1BQ9H9Y6 1135 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 SAYSD1Q9NPB0 183 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 EIF2B3Q9NR50 452 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 DTLQ9NZJ0 730 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 GULP1Q9UBP9 304 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 LGALS13Q9UHV8 139 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 IGSF10Q6WRI0 2623 aa9.38□□□□□ -0.91
TMEM39A-208ENST00000486159 ANKRD17O75179 2603 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 MGAQ8IWI9 3026 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 A0A0U1RQS6 177 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 EIF4E1BA6NMX2 242 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 H3BM21 787 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 KLK10O43240 276 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 SHBGP04278 402 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 GP1BAP07359 652 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 MLNP12872 115 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 C6P13671 934 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 HGFP14210 728 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 RBL1P28749 1068 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 LMAN1P49257 510 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 LIG3P49916 1009 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 DUSP3P51452 185 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 THOP1P52888 689 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 CCL7P80098 99 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 RALGDSQ12967 914 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms