RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 GORASP1Q9BQQ3 440 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 TRMT1Q9NXH9 659 aaKnown RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 NFKBIL1Q9UBC1 381 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 KMOO15229 486 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 VEGFDO43915 354 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 NUAK1O60285 661 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 NOBOXO60393 691 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A9O60656 530 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 DNAJC6O75061 913 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 MTX2O75431 263 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CDK14O94921 469 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 METTL18O95568 372 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 FGGP02679 453 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 RPLP0P05388 317 aaKnown RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A6P19224 532 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A1P22309 533 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A4P22310 534 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ALDH4A1P30038 563 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A3P35503 534 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A5P35504 534 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 FDFT1P37268 417 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ITGA9Q13797 1035 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 SEPT6Q14141 434 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CCNG2Q16589 344 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 INSCQ1MX18 579 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ATP13A5Q4VNC0 1218 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CERCAMQ5T4B2 595 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CDCP2Q5VXM1 449 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 FOXR1Q6PIV2 292 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 PPP1R21Q6ZMI0 780 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ADGRG6Q86SQ4 1221 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 LINC00523Q86TU6 105 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 CACTIN-AS1Q8N1I8 211 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 DCBLD1Q8N8Z6 715 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 DNAAF3Q8N9W5 541 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 KDF1Q8NAX2 398 aaPredicted RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 LRRN3Q9H3W5 708 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A7Q9HAW7 530 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A10Q9HAW8 530 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 UGT1A8Q9HAW9 530 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 IL26Q9NPH9 171 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 ZMIZ1Q9ULJ6 1067 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 KCNK6Q9Y257 313 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
PTCD1-205ENST00000485746 TDRD6O60522 2096 aaKnown RBP12.38□□□□□ -0.43
PTCD1-205ENST00000485746 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TCEA3O75764 348 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 SLC2A4P14672 509 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TPH1P17752 444 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 VCLP18206 1134 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 MSH3P20585 1137 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 AKT1P31749 480 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TMEM115Q12893 351 aaPredicted RBP12.37□□□□□ -0.43
PTCD1-205ENST00000485746 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 PTPRCAPQ14761 206 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 PLA2G4EQ3MJ16 856 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 AMZ1Q400G9 498 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 LDLRAP1Q5SW96 308 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 LRRTM4Q86VH4 590 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TRAPPC5Q8IUR0 188 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 SFTPA2Q8IWL1 248 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 ARL14Q8N4G2 192 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 ZNF398Q8TD17 642 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TLR10Q9BXR5 811 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 ASB8Q9H765 288 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 KLC4Q9NSK0 619 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 PAK5Q9P286 719 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 DNAJC16Q9Y2G8 782 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 PCDHB1Q9Y5F3 818 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 LRRK1Q38SD2 2015 aa12.37□□□□□ -0.43
PTCD1-205ENST00000485746 TMX2-CTNND1H3BSU7 103 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 NUDT21O43809 227 aaKnown RBP12.36□□□□□ -0.43
PTCD1-205ENST00000485746 KIF5CO60282 957 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 PRAMEF1O95521 474 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 AP2A1O95782 977 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 ETS1P14921 441 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 PNLIPP16233 465 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms