RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	TMEM199	Q8N511	208 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	OR10S1	Q8NGN2	331 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	MAGEC3	Q8TD91	643 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	DENND1A	Q8TEH3	1009 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	WFIKKN2	Q8TEU8	576 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	NTN5	Q8WTR8	489 aa	Predicted RBP	4.07	□□□□□ -1.76
FN1-222	ENST00000485567	PTER	Q96BW5	349 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	RMDN1	Q96DB5	314 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	SPATA17	Q96L03	361 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	CDRT15	Q96T59	188 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	TMPRSS5	Q9H3S3	457 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	KCNK15	Q9H427	330 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	C17orf75	Q9HAS0	396 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	WDR35	Q9P2L0	1181 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	STK39	Q9UEW8	545 aa		4.07	□□□□□ -1.76
FN1-222	ENST00000485567	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.07	□□□□□ -1.76
FN1-222	ENST00000485567	EIF4E1B	A6NMX2	242 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	BECN2	A8MW95	431 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	TIMM23	O14925	209 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	KCNN4	O15554	427 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	PLRG1	O43660	514 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	GGPS1	O95749	300 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	EGF	P01133	1207 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	CCDC175	P0C221	793 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	UGT1A1	P22309	533 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	NR2F2	P24468	414 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	RFX2	P48378	723 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	HNRNPH2	P55795	449 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	ROR2	Q01974	943 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	FOXM1	Q08050	763 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	HNF4G	Q14541	408 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	IL11RA	Q14626	422 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	SMN1	Q16637	294 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	PRTG	Q2VWP7	1150 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	CBWD6	Q4V339	395 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	CCDC92	Q53HC0	331 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	CBWD3	Q5JTY5	395 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	FNBP1L	Q5T0N5	605 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	NSUN5P2	Q63ZY6	315 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	IL27RA	Q6UWB1	636 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	INTS8	Q75QN2	995 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	LDB1	Q86U70	411 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	CCDC190	Q86UF4	302 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	PIM3	Q86V86	326 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	FOXRED2	Q8IWF2	684 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	TC2N	Q8N9U0	490 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	MIGA1	Q8NAN2	632 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	SLC38A9	Q8NBW4	561 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	LPGAT1	Q92604	370 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	TAAR8	Q969N4	342 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	RPL36AL	Q969Q0	106 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	KXD1	Q9BQD3	176 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	PPIL3	Q9H2H8	161 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	SLCO5A1	Q9H2Y9	848 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	DNAJC18	Q9H819	358 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	POT1	Q9NUX5	634 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	LARS	Q9P2J5	1176 aa	Known RBP	4.06	□□□□□ -1.76
FN1-222	ENST00000485567	IL17B	Q9UHF5	180 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	HACL1	Q9UJ83	578 aa		4.06	□□□□□ -1.76
FN1-222	ENST00000485567	ASTN2	O75129	1339 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	FAM170A	A1A519	330 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	RGS14	O43566	566 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE7	O76087	117 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	FYN	P06241	537 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	FAM200B	P0CF97	657 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE12F	P0CL80	117 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE12G	P0CL81	117 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE12I	P0CL82	117 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	CPT2	P23786	658 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	BDKRB2	P30411	391 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	HOXD3	P31249	432 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	APOBEC1	P41238	236 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	AMT	P48728	403 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	MXI1	P50539	228 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE1	Q13065	139 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE4	Q13068	117 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GPS2	Q13227	327 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	MVP	Q14764	893 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	AMZ1	Q400G9	498 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	CST9LP1	Q5W188	147 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	DUS1L	Q6P1R4	473 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	PAPD4	Q6PIY7	484 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	CASC1	Q6TDU7	716 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	HAUS6	Q7Z4H7	955 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	ADIPOR2	Q86V24	386 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	NRROS	Q86YC3	692 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	DNAJC10	Q8IXB1	793 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	VPS33A	Q96AX1	596 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	ORAI1	Q96D31	301 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GRAMD2B	Q96HH9	432 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	ADPGK	Q9BRR6	497 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	KRTAP4-7	Q9BYR0	210 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	GPR88	Q9GZN0	384 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	SEBOX	Q9HB31	216 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	SELENON	Q9NZV5	590 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	DDX25	Q9UHL0	483 aa	Known RBP	4.05	□□□□□ -1.76
FN1-222	ENST00000485567	TSPYL4	Q9UJ04	414 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	TUBE1	Q9UJT0	475 aa		4.05	□□□□□ -1.76
FN1-222	ENST00000485567	ZNF112	Q9UJU3	913 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms