RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 HGSNATQ68CP4 663 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 ARCQ7LC44 396 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 TECPR1Q7Z6L1 1165 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 FJX1Q86VR8 437 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 GLIS1Q8NBF1 620 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 NELFBQ8WX92 580 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 KLHL6Q8WZ60 621 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 SMARCE1Q969G3 411 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 NTAN1Q96AB6 310 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 PLEKHG4BQ96PX9 1271 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 DNAJC12Q9UKB3 198 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 PKDREJQ9NTG1 2253 aa17.72■□□□□ 0.43
DDR1-245ENST00000484556 PIKFYVEQ9Y2I7 2098 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 E2F3O00716 465 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 CYP2A6P11509 494 aaPredicted RBP17.71■□□□□ 0.43
DDR1-245ENST00000484556 NELFEP18615 380 aaKnown RBP17.71■□□□□ 0.43
DDR1-245ENST00000484556 PTGER4P35408 488 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 AP1S1P61966 158 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 PPP1CAP62136 330 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 KRT85P78386 507 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 GPS2Q13227 327 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 VWA5B1Q5TIE3 1220 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 NAA35Q5VZE5 725 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 IRGCQ6NXR0 463 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 ARHGAP36Q6ZRI8 547 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 TMEM26Q6ZUK4 368 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 STRADAQ7RTN6 431 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 SLFN11Q7Z7L1 901 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 ENDOVQ8N8Q3 282 aaKnown RBP17.71■□□□□ 0.43
DDR1-245ENST00000484556 COX14Q96I36 57 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 SLC39A8Q9C0K1 460 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 SCHIP1Q9P0W5 487 aaPredicted RBP17.71■□□□□ 0.43
DDR1-245ENST00000484556 PCDHGA10Q9Y5H3 936 aa17.71■□□□□ 0.43
DDR1-245ENST00000484556 ZGRF1Q86YA3 2104 aa17.71■□□□□ 0.42
DDR1-245ENST00000484556 C2CD4BA6NLJ0 364 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 PSMD11O00231 422 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 SMC2O95347 1197 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 GNA14O95837 355 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 CYP11B1P15538 503 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 CTPS1P17812 591 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 CAPZBP47756 277 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 VAV2P52735 878 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 PDE1BQ01064 536 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 ATP1A4Q13733 1029 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 MIIPQ5JXC2 388 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 LYPLAL1Q5VWZ2 237 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 SPNS3Q6ZMD2 512 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 CERS6Q6ZMG9 384 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 CUZD1Q86UP6 607 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 MMP21Q8N119 569 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 ARFGAP1Q8N6T3 406 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 SIDT2Q8NBJ9 832 aaKnown RBP17.7■□□□□ 0.42
DDR1-245ENST00000484556 MSANTD4Q8NCY6 345 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 SMIM14Q96QK8 99 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 SIX2Q9NPC8 291 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 AGPAT4Q9NRZ5 378 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 C5AR2Q9P296 337 aa17.7■□□□□ 0.42
DDR1-245ENST00000484556 HTRA2O43464 458 aaPredicted RBP17.69■□□□□ 0.42
DDR1-245ENST00000484556 CPNE3O75131 537 aaKnown RBP17.69■□□□□ 0.42
DDR1-245ENST00000484556 EBLN1P0CF75 366 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 PON1P27169 355 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 PTPN9P43378 593 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 NOMO3P69849 1222 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 LLGL1Q15334 1064 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 LCN10Q6JVE6 187 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 CYB5D1Q6P9G0 228 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 MED25Q71SY5 747 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 KCNMB4Q86W47 210 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 TRIM48Q8IWZ4 208 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 FAM71AQ8IYT1 594 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 ZBTB2Q8N680 514 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 TMEM102Q8N9M5 508 aaPredicted RBP17.69■□□□□ 0.42
DDR1-245ENST00000484556 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
DDR1-245ENST00000484556 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
DDR1-245ENST00000484556 SP110Q9HB58 689 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 SPG11Q96JI7 2443 aa17.69■□□□□ 0.42
DDR1-245ENST00000484556 IGHV5-51A0A0C4DH38 117 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 OR5K4A6NMS3 321 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 VIPP01282 170 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 HOXB4P17483 251 aaPredicted RBP17.68■□□□□ 0.42
DDR1-245ENST00000484556 RRADP55042 308 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 NSUN2Q08J23 767 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDR1-245ENST00000484556 TRAF2Q12933 501 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 IZUMO3Q5VZ72 239 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 LRRC66Q68CR7 880 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 SCYL2Q6P3W7 929 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 CREBRFQ8IUR6 639 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 PHYKPLQ8IUZ5 450 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 NXPE1Q8N323 547 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 AVL9Q8NBF6 648 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
DDR1-245ENST00000484556 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms