RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ARNTLO00327 626 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 NIPSNAP2O75323 286 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 IPO13O94829 963 aaKnown RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 TSPAN12O95859 305 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PRNPP04156 253 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 POU3F3P20264 500 aaPredicted RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 KCNA5P22460 613 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 CLCN7P51798 805 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 NFKB2Q00653 900 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 KDSRQ06136 332 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RALGDSQ12967 914 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 GRM2Q14416 872 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ZNF234Q14588 700 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 UGT3A1Q6NUS8 523 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RFLNAQ6ZTI6 216 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 DPPA4Q7L190 304 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 SLC22A9Q8IVM8 553 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RAVER1Q8IY67 606 aaKnown RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 NXPE1Q8N323 547 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 CD200R1Q8TD46 325 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 FGF14Q92915 247 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PBXIP1Q96AQ6 731 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 CNDP1Q96KN2 507 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ATOH8Q96SQ7 321 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 MYLK2Q9H1R3 596 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ALG9Q9H6U8 611 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PCDH12Q9NPG4 1184 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 LATS2Q9NRM7 1088 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 GTSE1Q9NYZ3 720 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 THAP10Q9P2Z0 257 aaPredicted RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 HEY2Q9UBP5 337 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PPM1HQ9ULR3 514 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RAP2CQ9Y3L5 183 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 NUMBLQ9Y6R0 609 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 BPTFQ12830 3046 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 IGLV3-16A0A075B6K0 115 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 NEMP2A6NFY4 417 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 HSPA4LO95757 839 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 KITP10721 976 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 MTHFD2P13995 350 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 HK2P52789 917 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 AQP5P55064 265 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 DCDC1P59894 354 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ARHGEF7Q14155 803 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ARL13AQ5H913 290 aaPredicted RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 FAM91A1Q658Y4 838 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 TRIM67Q6ZTA4 783 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PIWIL4Q7Z3Z4 852 aaKnown RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 SFTPA1Q8IWL2 248 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ZNF366Q8N895 744 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 GIMAP7Q8NHV1 300 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 UCMAQ8WVF2 138 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 L3HYPDHQ96EM0 354 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 SGF29Q96ES7 293 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 FAM129BQ96TA1 746 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 KXD1Q9BQD3 176 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RPP25Q9BUL9 199 aaKnown RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 ILKAPQ9H0C8 392 aaPredicted RBP13.93□□□□□ -0.18
CLK3-204ENST00000483723 WWP1Q9H0M0 922 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 CDH19Q9H159 772 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 POMKQ9H5K3 350 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 RAD18Q9NS91 495 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ZDHHC3Q9NYG2 299 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 PKD2L2Q9NZM6 624 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 FSBPO95073 299 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 IMPDH1P20839 514 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 GDI1P31150 447 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 SCTRP47872 440 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 ACTN3Q08043 901 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 GALNT1Q10472 559 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 OR4D1Q15615 310 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 PREPLQ4J6C6 727 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 FNDC3BQ53EP0 1204 aaKnown RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 HSD11B1LQ7Z5J1 315 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 TECPR1Q7Z6L1 1165 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 TTC7BQ86TV6 843 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 MTDHQ86UE4 582 aaKnown RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 ZNF781Q8N8C0 355 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 STAG3L4Q8TBR4 150 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 STON2Q8WXE9 905 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 OR8D1Q8WZ84 308 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 ULK4Q96C45 1275 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 TRMT61BQ9BVS5 477 aaKnown RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 BOCQ9BWV1 1114 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 CLPBQ9H078 707 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 EPS15L1Q9UBC2 864 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 MARCOQ9UEW3 520 aaPredicted RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 CRLS1Q9UJA2 301 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 TRMT6Q9UJA5 497 aaKnown RBP13.92□□□□□ -0.18
CLK3-204ENST00000483723 IKZF3Q9UKT9 509 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 SARDHQ9UL12 918 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 TMPRSS11EQ9UL52 423 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms