RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 LUC7LQ9NQ29 371 aaKnown RBP19.65■□□□□ 0.74
HPS4-213ENST00000483631 ZNF711Q9Y462 761 aa19.65■□□□□ 0.74
HPS4-213ENST00000483631 ALG6Q9Y672 507 aa19.65■□□□□ 0.74
HPS4-213ENST00000483631 KIR2DS5A0A0G2JLQ3 304 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 PRAMEF33A0A0G2JMD5 474 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 A0A0G2JNG1 304 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 A6NCN8 305 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 C9orf172C9J069 976 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 KIR2DS3K7RE56 304 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 GRID2O43424 1007 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 PRAMEF10O60809 474 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 EPOP01588 193 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 F3P13726 295 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 ETV5P41161 510 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 EPHA4P54764 986 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 CFHR1Q03591 330 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 KIR2DS5Q14953 304 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 TFDP3Q5H9I0 405 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 IYDQ6PHW0 289 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 CHST15Q7LFX5 561 aaPredicted RBP19.64■□□□□ 0.73
HPS4-213ENST00000483631 KATNAL2Q8IYT4 538 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 TC2NQ8N9U0 490 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 AGBL5Q8NDL9 886 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 OR10G6Q8NH81 332 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 DTX3LQ8TDB6 740 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 CALR3Q96L12 384 aaKnown RBP19.64■□□□□ 0.73
HPS4-213ENST00000483631 CCDC74BQ96LY2 380 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 PLEKHG4BQ96PX9 1271 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 SLC38A3Q99624 504 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 SPATA16Q9BXB7 569 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 CEP41Q9BYV8 373 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.64■□□□□ 0.73
HPS4-213ENST00000483631 GPR63Q9BZJ6 419 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 EPB41L1Q9H4G0 881 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 TRABDQ9H4I3 376 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 ADGRG1Q9Y653 693 aa19.64■□□□□ 0.73
HPS4-213ENST00000483631 ATMQ13315 3056 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 CFAP46Q8IYW2 2715 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SDK2Q58EX2 2172 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 DUX1O43812 170 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 CST8O60676 142 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SLC25A14O95258 325 aaPredicted RBP19.63■□□□□ 0.73
HPS4-213ENST00000483631 NOP2P46087 812 aaKnown RBP19.63■□□□□ 0.73
HPS4-213ENST00000483631 MAPK10P53779 464 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 DYNLT1P63172 113 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 HHEXQ03014 270 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 C11orf63Q6NUN7 778 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 WDR74Q6RFH5 385 aaPredicted RBP19.63■□□□□ 0.73
HPS4-213ENST00000483631 XKR5Q6UX68 686 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SPOCD1Q6ZMY3 1216 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SLC9B2Q86UD5 537 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 PHYKPLQ8IUZ5 450 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 RCOR2Q8IZ40 523 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 GPR26Q8NDV2 337 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 GLYATL1Q969I3 302 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 TAAR9Q96RI9 348 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 TRIM5Q9C035 493 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 ATXN10Q9UBB4 475 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 TBC1D29Q9UFV1 150 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 FAM153AQ9UHL3 310 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SHOC2Q9UQ13 582 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.63■□□□□ 0.73
HPS4-213ENST00000483631 PCDHB11Q9Y5F2 797 aa19.63■□□□□ 0.73
HPS4-213ENST00000483631 PCYT1BQ9Y5K3 369 aaPredicted RBP19.63■□□□□ 0.73
HPS4-213ENST00000483631 LOC285095A0A1B0GVY8 99 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 B4E171 279 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 CHUKO15111 745 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 VEGFDO43915 354 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 ZRANB2O95218 330 aaKnown RBP eCLIP19.62■□□□□ 0.73
HPS4-213ENST00000483631 MT-CYBP00156 380 aaPredicted RBP19.62■□□□□ 0.73
HPS4-213ENST00000483631 PRB1P04280 392 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 ACP5P13686 325 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 CSF2RBP32927 897 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 CSTF2P33240 577 aaKnown RBP eCLIP19.62■□□□□ 0.73
HPS4-213ENST00000483631 HMGCLP35914 325 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 TSPAN7P41732 249 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 WASHC5Q12768 1159 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 PPP2R5EQ16537 467 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 PCSK7Q16549 785 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 ZDHHC20Q5W0Z9 365 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 SPATA22Q8NHS9 363 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 P3H4Q92791 437 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 AHCYL2Q96HN2 611 aaKnown RBP19.62■□□□□ 0.73
HPS4-213ENST00000483631 RBM41Q96IZ5 413 aaKnown RBP19.62■□□□□ 0.73
HPS4-213ENST00000483631 VPS35Q96QK1 796 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 DDA1Q9BW61 102 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 UCK1Q9HA47 277 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.62■□□□□ 0.73
HPS4-213ENST00000483631 FOXJ2Q9P0K8 574 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 HYOU1Q9Y4L1 999 aa19.62■□□□□ 0.73
HPS4-213ENST00000483631 GCN1Q92616 2671 aaKnown RBP19.62■□□□□ 0.73
HPS4-213ENST00000483631 hCG_1818297A0A087WSY0 165 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 HACD1B0YJ81 288 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 EFSO43281 561 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 EML2O95834 649 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 TNNT1P13805 278 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 ZNF8P17098 575 aaPredicted RBP19.61■□□□□ 0.73
HPS4-213ENST00000483631 CYLC1P35663 651 aaPredicted RBP19.61■□□□□ 0.73
HPS4-213ENST00000483631 SPA17Q15506 151 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 NKAIN2Q5VXU1 208 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms