RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC24A5Q71RS6 500 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 NLRP9Q7RTR0 991 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 TSPYL5Q86VY4 417 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 CRLF3Q8IUI8 442 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 SPATA2LQ8IUW3 424 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 NUDCD3Q8IVD9 361 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ZNF567Q8N184 647 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ZNF276Q8N554 614 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 TEX9Q8N6V9 391 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ZMIZ2Q8NF64 920 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ABHD4Q8TB40 342 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 IPCEF1Q8WWN9 437 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 SERAC1Q96JX3 654 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 C1orf74Q96LT6 269 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CEP295NLQ96MC4 621 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 SERPINB11Q96P15 392 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FAM111AQ96PZ2 611 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 LGMNQ99538 433 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FAM167BQ9BTA0 163 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 WWP1Q9H0M0 922 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 DUSP15Q9H1R2 295 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 SMOC2Q9H3U7 446 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 RGS18Q9NS28 235 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 GPR27Q9NS67 375 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 THAP1Q9NVV9 213 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ARHGEF38Q9NXL2 777 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ZFP69BQ9UJL9 534 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 GPR55Q9Y2T6 319 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 TSC2P49815 1807 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 WDR27A2RRH5 827 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 MYADML2A6NDP7 307 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 WASH4PA8MWX3 477 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 B9A039 149 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 NRP1O14786 923 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 HCRTO43612 131 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CACNG3O60359 315 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 SOAT2O75908 522 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 OAZ2O95190 189 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PGK1P00558 417 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 BPGMP07738 259 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CD3EP07766 207 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CALB2P22676 271 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PTPN4P29074 926 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 TPP2P29144 1249 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 EPHB2P29323 1055 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CD52P31358 61 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 NDUFV1P49821 464 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 SERPINB8P50452 374 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 LINC00310P59036 64 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 FAM189BP81408 668 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 SMAD3P84022 425 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 PDE1BQ01064 536 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PPARDQ03181 441 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 YWHAHQ04917 246 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 ZBTB16Q05516 673 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 GALNT1Q10472 559 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 ASPHQ12797 758 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 ELAVL2Q12926 359 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 PMS2P11Q13670 270 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 ITGA7Q13683 1181 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 LAMB3Q13751 1172 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 LPIN1Q14693 890 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 SMAD2Q15796 467 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 PFKFB4Q16877 469 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 FAXCQ5TGI0 409 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PDPK2PQ6A1A2 396 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PLBD1Q6P4A8 553 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PACS1Q6VY07 963 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PRPF39Q86UA1 669 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 TMEM135Q86UB9 458 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 MON1AQ86VX9 555 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 KIRREL3Q8IZU9 778 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PYROXD2Q8N2H3 581 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CCDC33Q8N5R6 958 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 ATG16L2Q8NAA4 619 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 STKLD1Q8NE28 680 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 RDH11Q8TC12 318 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 PPP4R1Q8TF05 950 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 STON2Q8WXE9 905 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 TRIB2Q92519 343 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CERS2Q96G23 380 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 TCTN2Q96GX1 697 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 OXNAD1Q96HP4 312 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 HIC2Q96JB3 615 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 RMDN2Q96LZ7 410 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 GLT1D1Q96MS3 346 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 TSNARE1Q96NA8 513 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 CDK5RAP1Q96SZ6 601 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 PKMYT1Q99640 499 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 ADAM2Q99965 735 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 SORBS1Q9BX66 1292 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 TKTL2Q9H0I9 626 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 MMADHCQ9H3L0 296 aaPredicted RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 MRM3Q9HC36 420 aaKnown RBP7.75□□□□□ -1.17
SNX13-208ENST00000482558 SEPT10Q9P0V9 454 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 DUSP13Q9UII6 198 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 TUBD1Q9UJT1 453 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 VANGL2Q9ULK5 521 aa7.75□□□□□ -1.17
SNX13-208ENST00000482558 MAFFQ9ULX9 164 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms