RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MUC3BQ9H195 1237 aa14.79□□□□□ -0.04
ATG4B-220ENST00000482507 AGPAT4Q9NRZ5 378 aa14.79□□□□□ -0.04
ATG4B-220ENST00000482507 GALPQ9UBC7 116 aa14.79□□□□□ -0.04
ATG4B-220ENST00000482507 TIMM22Q9Y584 194 aa14.79□□□□□ -0.04
ATG4B-220ENST00000482507 DHRS12A0PJE2 317 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 HNRNPRO43390 633 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 TRMUO75648 421 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RPP40O75818 363 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PARNO95453 639 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 HSD17B1P14061 328 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ATP6V0D1P61421 351 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PLOD1Q02809 727 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 IL10RBQ08334 325 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ADRM1Q16186 407 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 MAP7D1Q3KQU3 841 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PAQR3Q6TCH7 311 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 COLGALT2Q8IYK4 626 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 CMTR2Q8IYT2 770 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ADGRG5Q8IZF4 528 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 FAM193BQ96PV7 902 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 HOPXQ9BPY8 73 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 SEMA4BQ9NPR2 832 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 NDUFAF1Q9Y375 327 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RAMP2O60895 175 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 MTHFD1P11586 935 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 GFAPP14136 432 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 SOX11P35716 441 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 STC1P52823 247 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RABL3Q5HYI8 236 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ATAD1Q8NBU5 361 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 OR4L1Q8NH43 312 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 VPS33AQ96AX1 596 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 LRRC58Q96CX6 371 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 B3GALT6Q96L58 329 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 UROC1Q96N76 676 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RPRD1AQ96P16 312 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 HAUS8Q9BT25 410 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ELAC1Q9H777 363 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 CATSPERZQ9NTU4 200 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 RSL24D1Q9UHA3 163 aaKnown RBP14.78□□□□□ -0.04
ATG4B-220ENST00000482507 ZNF225Q9UK10 706 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PCDHA9Q9Y5H5 950 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 SPO11Q9Y5K1 396 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 GPR45Q9Y5Y3 372 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 PLXNA3P51805 1871 aa14.78□□□□□ -0.04
ATG4B-220ENST00000482507 AQP12BA6NM10 295 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 DRGXA6NNA5 263 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 ZBBXA8MT70 800 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 CDC7O00311 574 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 ANGPT2O15123 496 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 ARPC2O15144 300 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 MATN4O95460 622 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 LBPP18428 481 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 CES1P23141 567 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 HPCAP84074 193 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 CTBSQ01459 385 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 CLCQ05315 142 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 DSC1Q08554 894 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 NADSYN1Q6IA69 706 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 LCN8Q6JVE9 175 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 MRNIPQ6NTE8 343 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 BLOC1S3Q6QNY0 202 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 TMEM173Q86WV6 379 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-220ENST00000482507 AQP12AQ8IXF9 295 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 ALDH16A1Q8IZ83 802 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 FEM1CQ96JP0 617 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 BTN2A3PQ96KV6 586 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 SLC30A3Q99726 388 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 TFB2MQ9H5Q4 396 aaKnown RBP14.77□□□□□ -0.04
ATG4B-220ENST00000482507 TMCO1Q9UM00 188 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 USP22Q9UPT9 525 aa14.77□□□□□ -0.04
ATG4B-220ENST00000482507 CCDC85CA6NKD9 419 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 ECI2O75521 394 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 CLIC3O95833 236 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 FMO4P31512 558 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 CDKN1CP49918 316 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-220ENST00000482507 AGTR2P50052 363 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 TSNQ15631 228 aaKnown RBP14.77□□□□□ -0.05
ATG4B-220ENST00000482507 PAGE3Q5JUK9 113 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 UGT3A1Q6NUS8 523 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 SCIMPQ6UWF3 145 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 NPAS4Q8IUM7 802 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 MFSD2AQ8NA29 543 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 BRSK1Q8TDC3 778 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 GAB3Q8WWW8 586 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 TMEM125Q96AQ2 219 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 CDKN2AIPNLQ96HQ2 116 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 POLR1EQ9GZS1 481 aaKnown RBP14.77□□□□□ -0.05
ATG4B-220ENST00000482507 HACD3Q9P035 362 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 CXXC1Q9P0U4 656 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-220ENST00000482507 SLAMF8Q9P0V8 285 aa14.77□□□□□ -0.05
ATG4B-220ENST00000482507 A0A0D9SEW6 157 aa14.76□□□□□ -0.05
ATG4B-220ENST00000482507 UBA6A0AVT1 1052 aaPredicted RBP14.76□□□□□ -0.05
ATG4B-220ENST00000482507 SUPT3HB4E1H0 165 aa14.76□□□□□ -0.05
ATG4B-220ENST00000482507 ACOX3O15254 700 aa14.76□□□□□ -0.05
ATG4B-220ENST00000482507 PRAMEF11O60813 436 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 806.7 ms