RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 CRLS1Q9UJA2 301 aa11.22□□□□□ -0.61
MACF1-217ENST00000480624 CNOT6Q9ULM6 557 aaKnown RBP11.22□□□□□ -0.61
MACF1-217ENST00000480624 CORO1CQ9ULV4 474 aaPredicted RBP11.22□□□□□ -0.61
MACF1-217ENST00000480624 NCKAP1Q9Y2A7 1128 aa11.22□□□□□ -0.61
MACF1-217ENST00000480624 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
MACF1-217ENST00000480624 MED16Q9Y2X0 877 aa11.22□□□□□ -0.61
MACF1-217ENST00000480624 VWA7Q9Y334 891 aa11.22□□□□□ -0.61
MACF1-217ENST00000480624 IGLV3-16A0A075B6K0 115 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 TMEM120BA0PK00 339 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 C10orf142B7Z368 130 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 K7ESM1 405 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PFDN6O15212 129 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PRPF4O43172 522 aaKnown RBP eCLIP11.21□□□□□ -0.61
MACF1-217ENST00000480624 PHGDHO43175 533 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 RNGTTO60942 597 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 TM7SF2O76062 418 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 SOD1P00441 154 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 MPOP05164 745 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 C2P06681 752 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ACADMP11310 421 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PKMP14618 531 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 SAT1P21673 171 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 FDXRP22570 491 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
MACF1-217ENST00000480624 TYK2P29597 1187 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 RPS9P46781 194 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 TPMTP51580 245 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 B4GALNT1Q00973 533 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PPARDQ03181 441 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 FGL2Q14314 439 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ITIH4Q14624 930 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ZNF284Q2VY69 593 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 TMEM259Q4ZIN3 620 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 SETMARQ53H47 684 aaPredicted RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 GPRC6AQ5T6X5 926 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 FAM45BPQ6NSW5 357 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 CDHR3Q6ZTQ4 885 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 FAM124AQ86V42 546 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.21□□□□□ -0.61
MACF1-217ENST00000480624 FAM76AQ8TAV0 307 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 MDM1Q8TC05 714 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 FAM45AQ8TCE6 357 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 BTN2A2Q8WVV5 523 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ALKBH8Q96BT7 664 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 NUS1Q96E22 293 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 VPS35Q96QK1 796 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ZSCAN5AQ9BUG6 496 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PREBQ9HCU5 417 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 KCNK9Q9NPC2 374 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 MKS1Q9NXB0 559 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 USP36Q9P275 1121 aaKnown RBP11.21□□□□□ -0.61
MACF1-217ENST00000480624 PRSS21Q9Y6M0 314 aa11.21□□□□□ -0.61
MACF1-217ENST00000480624 ATG2BQ96BY7 2078 aa11.21□□□□□ -0.62
MACF1-217ENST00000480624 BPTFQ12830 3046 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 A0A096LPK6 155 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 A0A1W2PQU0 124 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 PRMT5O14744 637 aaPredicted RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 WISP3O95389 354 aaPredicted RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 TOP3BO95985 862 aaKnown RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 ESR1P03372 595 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 SLC35E2BP0CK96 405 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 STMN1P16949 149 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 ZNF7P17097 686 aaPredicted RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 CD9P21926 228 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 CRABP2P29373 138 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 ACSL1P33121 698 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 CRHR1P34998 444 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 RPA3P35244 121 aaPredicted RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 SLC18A1P54219 525 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 RAB10P61026 200 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 RPS21P63220 83 aaKnown RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 IRF9Q00978 393 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 ZNF460Q14592 562 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 WSCD2Q2TBF2 565 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
MACF1-217ENST00000480624 TMEM31Q5JXX7 168 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 KIAA1161Q6NSJ0 714 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 NEK5Q6P3R8 708 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 TMEM207Q6UWW9 146 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 CLEC14AQ86T13 490 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 SPEM1Q8N4L4 309 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 CLDN19Q8N6F1 224 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 DDHD1Q8NEL9 900 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 TSTD1Q8NFU3 115 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 NAT14Q8WUY8 206 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 GLYATL1Q969I3 302 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 TSPAN17Q96FV3 270 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 APOPT1Q96IL0 206 aa11.2□□□□□ -0.62
MACF1-217ENST00000480624 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms