RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 STAU1O95793 577 aaKnown RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 TRAPPC2P0DI81 140 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 TRAPPC2BP0DI82 140 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CHRM3P20309 590 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 RRM2P31350 389 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 NOS2P35228 1153 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 NUDT1P36639 197 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 PIGAP37287 484 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CXCR4P61073 352 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 KCNAB2Q13303 367 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 RCAN2Q14206 197 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ACAP2Q15057 778 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 RFX4Q33E94 735 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 PLEKHG6Q3KR16 790 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 RABL3Q5HYI8 236 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CEP78Q5JTW2 689 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CLEC6AQ6EIG7 209 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 NAPEPLDQ6IQ20 393 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 PDZD4Q76G19 769 aaPredicted RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 IFNEQ86WN2 208 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 RALGPS2Q86X27 583 aaPredicted RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 FAM20CQ8IXL6 584 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 KLHDC8BQ8IXV7 354 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 UBQLNLQ8IYU4 475 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 SIX5Q8N196 739 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 SPATA6LQ8N4H0 392 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.59□□□□□ -0.71
SIK3-210ENST00000480468 FIG4Q92562 907 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ZHX1-C8orf76Q96EF9 292 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CCDC90BQ9GZT6 254 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 FAM49BQ9NUQ9 324 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 TMEM45AQ9NWC5 275 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 DNAJB9Q9UBS3 223 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 C3orf18Q9UK00 162 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 CAB39Q9Y376 341 aaPredicted RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 GRIP1Q9Y3R0 1128 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
SIK3-210ENST00000480468 ZNF646O15015 1829 aaPredicted RBP10.59□□□□□ -0.71
SIK3-210ENST00000480468 LOC100130705A0A1B0GUX0 176 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PTGES3LE9PB15 166 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 EEF2KO00418 725 aaKnown RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 NCAM2O15394 837 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PSMD3O43242 534 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 ZW10O43264 779 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 HUS1O60921 280 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PRKD3O94806 890 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 LRIG2O94898 1065 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 ITGB3P05106 788 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 LTA4HP09960 611 aaKnown RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 LBPP18428 481 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PRKACBP22694 351 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 ALDH4A1P30038 563 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CD6P30203 668 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 MTHFRP42898 656 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SEPHS1P49903 392 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SLC12A2P55011 1212 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 NFKB2Q00653 900 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 EMX2Q04743 252 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CHRNB3Q05901 458 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CDK5R2Q13319 367 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CLCA4Q14CN2 919 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SULT1C3Q6IMI6 304 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PKN3Q6P5Z2 889 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 ZBTB8OSQ8IWT0 167 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 GALNT12Q8IXK2 581 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PYROXD2Q8N2H3 581 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 MCOLN3Q8TDD5 553 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 RPL10LQ96L21 214 aaKnown RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 VAT1Q99536 393 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 GDF15Q99988 308 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 TMEM246Q9BRR3 403 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 LRRC3Q9BY71 257 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 RPF1Q9H9Y2 349 aaKnown RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 DIABLOQ9NR28 239 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 STMN3Q9NZ72 180 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 TPRKBQ9Y3C4 175 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 MGAMO43451 1857 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SPATA31C2B4DYI2 1134 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 KCNK1O00180 336 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CCRL2O00421 344 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 TEX28O15482 410 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 NFICP08651 508 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 BDNFP23560 247 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 OR2B6P58173 313 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 LSM3P62310 102 aaKnown RBP10.58□□□□□ -0.72
SIK3-210ENST00000480468 SLC35A2P78381 396 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SP4Q02446 784 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 CSHL1Q14406 222 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 POU6F1Q14863 301 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 NPTX1Q15818 432 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 SLC14A2Q15849 920 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 TYSND1Q2T9J0 566 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 PCID2Q5JVF3 399 aa10.58□□□□□ -0.72
SIK3-210ENST00000480468 COLEC12Q5KU26 742 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms