RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 OPA1O60313 960 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 BRINP1O60477 761 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PMPCBO75439 489 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 C6P13671 934 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 NME1P15531 152 aaKnown RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 TSHRP16473 764 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 XPAP23025 273 aaPredicted RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 ADRA1DP25100 572 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 ABCG1P45844 678 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 SPINT3P49223 89 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 LIG3P49916 1009 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 CLDN2P57739 230 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PFN3P60673 137 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PTSQ03393 145 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 GPS1Q13098 491 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 ARHGEF7Q14155 803 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PPP1R7Q15435 360 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 POM121L1PQ3SYA9 428 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 CCDC157Q569K6 752 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 TPRG1LQ5T0D9 272 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 SEL1L3Q68CR1 1132 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 LRRC66Q68CR7 880 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 C8orf74Q6P047 294 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 ADAMTSL4Q6UY14 1074 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 Q6ZSR6 202 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 TMEM135Q86UB9 458 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 MPP5Q8N3R9 675 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 TP53I13Q8NBR0 393 aaPredicted RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 IPMKQ8NFU5 416 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 CXorf40AQ8TE69 158 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 STYXQ8WUJ0 223 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PRR11Q96HE9 360 aaPredicted RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 SERPINB12Q96P63 405 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 KRT12Q99456 494 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 ZSCAN5AQ9BUG6 496 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 SLC17A9Q9BYT1 436 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 C10orf88Q9H8K7 445 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 NLGN3Q9NZ94 848 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PKD2L2Q9NZM6 624 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 APPL1Q9UKG1 709 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 PNMA8BQ9ULN7 279 aaPredicted RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 UTP11Q9Y3A2 253 aaKnown RBP8.86□□□□□ -0.99
DDX56-211ENST00000479602 CSNK1G3Q9Y6M4 447 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 RP1P56715 2156 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TRBV5-4A0A0C4DH59 114 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 C1orf232A0A0U1RR37 186 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 FAM237BA0A1B0GVD1 139 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 C2orf81A6NN90 581 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 EFCAB8A8MWE9 144 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 E7EVH7 732 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 K7ESM1 405 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TPP1O14773 563 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TNFRSF10CO14798 259 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TTI1O43156 1089 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 BNIP3LO60238 219 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 SDC3O75056 442 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TMEM63AO94886 807 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TTC4O95801 387 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 PAK4O96013 591 aaPredicted RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 TUBBP07437 444 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 GSTM1P09488 218 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 LPOP22079 712 aaPredicted RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 AKT2P31751 481 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 RABIFP47224 123 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 LSSP48449 732 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 KIAA1024LP59773 190 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 BASP1P80723 227 aaKnown RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 SEMG2Q02383 582 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 GSTM4Q03013 218 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 CUL1Q13616 776 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 GPR33Q49SQ1 333 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 PCID2Q5JVF3 399 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 GALNT7Q86SF2 657 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 CAND1Q86VP6 1230 aaKnown RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 SDR16C5Q8N3Y7 309 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TRAM1L1Q8N609 369 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 LRRN4Q8WUT4 740 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 KLK6Q92876 244 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 EID2BQ96D98 161 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 SCARF2Q96GP6 870 aaPredicted RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 APOLD1Q96LR9 279 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 ZNF578Q96N58 590 aaPredicted RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 FICDQ9BVA6 458 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TEX101Q9BY14 249 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 ASCL3Q9NQ33 180 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 FAM114A2Q9NRY5 505 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TREX1Q9NSU2 369 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 NLE1Q9NVX2 485 aaPredicted RBP8.85□□□□□ -0.99
DDX56-211ENST00000479602 GRHL1Q9NZI5 618 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 BFARQ9NZS9 450 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 VPS18Q9P253 973 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 ASIC3Q9UHC3 531 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 TCAF1Q9Y4C2 921 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 PCDHB1Q9Y5F3 818 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 MYLKQ15746 1914 aa8.85□□□□□ -0.99
DDX56-211ENST00000479602 LRP4O75096 1905 aa8.84□□□□□ -0.99
DDX56-211ENST00000479602 IGLV3-16A0A075B6K0 115 aa8.84□□□□□ -0.99
DDX56-211ENST00000479602 EME2A4GXA9 379 aaPredicted RBP8.84□□□□□ -0.99
DDX56-211ENST00000479602 A6NNZ2 444 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms