RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 COPS4Q9BT78 406 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 RMND5AQ9H871 391 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 KRT84Q9NSB2 600 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 SDK1Q7Z5N4 2213 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 CCRL2O00421 344 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CD3EAPO15446 510 aaKnown RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 POU2F1P14859 743 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CYP2B6P20813 491 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 STXBP5Q5T5C0 1151 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 VPS37AQ8NEZ2 397 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 EHD1Q9H4M9 534 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 MAP10Q9P2G4 905 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 NUP98P52948 1817 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CA12O43570 354 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 UGT2B4P06133 528 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 ALOX5P09917 674 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 SLC2A7Q6PXP3 512 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CDH24Q86UP0 819 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 PIK3C3Q8NEB9 887 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 SPATA2Q9UM82 520 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 TBC1D30Q9Y2I9 924 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 WBP11Q9Y2W2 641 aaKnown RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 F8W810 466 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ZNF197O14709 1029 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GPR182O15218 404 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 SERPINI2O75830 405 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GSTT2P0CG29 244 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GSTT2BP0CG30 244 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PTPN9P43378 593 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 CASP9P55211 416 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 NEK10Q6ZWH5 1172 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 USP50Q70EL3 339 aaPredicted RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 SELENOMQ8WWX9 145 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FBXO32Q969P5 355 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 LINGO1Q96FE5 620 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 KCNS3Q9BQ31 491 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 YIPF2Q9BWQ6 316 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PDZD7Q9H5P4 517 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TOR4AQ9NXH8 423 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PDP1Q9P0J1 537 aaPredicted RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 KLHL3Q9UH77 587 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ZNF232Q9UNY5 417 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 KRT87PA6NCN2 255 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PCP4L1A6NKN8 68 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ENPP3O14638 875 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 AIREO43918 545 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM189A1O60320 539 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ULK1O75385 1050 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 CYBBP04839 570 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 COL6A2P12110 1019 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 KBTBD7Q8WVZ9 684 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GPR21Q99679 349 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TRIM62Q9BVG3 475 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 EIF2B4Q9UI10 523 aaKnown RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM72CH0Y354 149 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TLR5O60602 858 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PAGE1O75459 146 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 NUDT6P53370 316 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 SRP54P61011 504 aaKnown RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 UFM1P61960 85 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TUBA4AP68366 448 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 DAG1Q14118 895 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM72AQ5TYM5 149 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM72DQ6L9T8 149 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 DLK2Q6UY11 383 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM72BQ86X60 149 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 FAM45AQ8TCE6 357 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 PPP1R14BQ96C90 147 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TRMOQ9BU70 441 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ADARB2Q9NS39 739 aaKnown RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 SMPD4Q9NXE4 827 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 GALPQ9UBC7 116 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 TCAF1Q9Y4C2 921 aa13.43□□□□□ -0.26
USP42-206ENST00000479544 MAGED1Q9Y5V3 778 aaPredicted RBP13.43□□□□□ -0.26
USP42-206ENST00000479544 RGS10O43665 173 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 HOXD12P35452 270 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 TBX4P57082 545 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 ZNF221Q9UK13 617 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 FZD10Q9ULW2 581 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 KCTD3Q9Y597 815 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 LY75O60449 1722 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 IQCF5A8MTL0 148 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 NBNO60934 754 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 PRKD3O94806 890 aa13.42□□□□□ -0.26
USP42-206ENST00000479544 CD36P16671 472 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms