RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 RITA1Q96K30 269 aa7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 PIMREGQ9BSJ6 248 aa7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 DNAJC18Q9H819 358 aa7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 IPO11Q9UI26 975 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 ADAM21Q9UKJ8 722 aa7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 EIF2AK4Q9P2K8 1649 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-217ENST00000479511 POC1B-GALNT4F8VUJ3 575 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 DDX39AO00148 427 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 INPPL1O15357 1258 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ZNF202O95125 648 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 TOP3BO95985 862 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 PEX11BO96011 259 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ICAM1P05362 532 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ZFYP08048 801 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 BMP5P22003 454 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 TNFRSF8P28908 595 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 GPR12P47775 334 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ATP13A5Q4VNC0 1218 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ENTPD8Q5MY95 495 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 TSTD2Q5T7W7 516 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 CNSTQ6PJW8 725 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 PQLC2Q6ZP29 291 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 LINGO2Q7L985 606 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 NUP54Q7Z3B4 507 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 IGFN1Q86VF2 1251 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 CEP57Q86XR8 500 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 SYCP3Q8IZU3 236 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ZNF619Q8N2I2 560 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ARSGQ96EG1 525 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ZNF558Q96NG5 402 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ABHD6Q9BV23 337 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 CDT1Q9H211 546 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 TRMT1Q9NXH9 659 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 COPG2Q9UBF2 871 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 LIPT1Q9Y234 373 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 TESMINQ9Y4I5 508 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 EPN1Q9Y6I3 576 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 DISP2A7MBM2 1401 aa7.4□□□□□ -1.22
GAPVD1-217ENST00000479511 EP400Q96L91 3159 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 ADGRB2O60241 1585 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 ASXL1Q8IXJ9 1541 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 DUOX2Q9NRD8 1548 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 A0A1W2PPM1 405 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 CCDC188H7C350 402 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 HSPB6O14558 160 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 MGST3O14880 152 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 KIF1CO43896 1103 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 KERAO60938 352 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 RGS11O94810 467 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 SIX3O95343 332 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 LCKP06239 509 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 OR52Z1P0C646 297 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 TFEBP19484 476 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 HLA-DPA1P20036 260 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 MATR3P43243 847 aaKnown RBP eCLIP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 SLC12A2P55011 1212 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 ITGADQ13349 1161 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 FAM153CQ494X1 144 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 PARP10Q53GL7 1025 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 DHRS7BQ6IAN0 325 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 RAB12Q6IQ22 244 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 Q6YL49 198 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 HAUS6Q7Z4H7 955 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 DENND6AQ8IWF6 608 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 LRRC57Q8N9N7 239 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 BEST2Q8NFU1 509 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 MOAP1Q96BY2 351 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 HARBI1Q96MB7 349 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 TOX2Q96NM4 488 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 DACH2Q96NX9 599 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 FERMT1Q9BQL6 677 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 LHPPQ9H008 270 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 KCNK15Q9H427 330 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 ANKZF1Q9H8Y5 726 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 LARSQ9P2J5 1176 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 UBA2Q9UBT2 640 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 UTS2RQ9UKP6 389 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 RAP2CQ9Y3L5 183 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 WNT6Q9Y6F9 365 aa7.39□□□□□ -1.23
GAPVD1-217ENST00000479511 DCCP43146 1447 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 A0A0B4J293 547 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 C17orf102A2RUQ5 167 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 ANXA2P2A6NMY6 339 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 FOXO6A8MYZ6 492 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 KDM4EB2RXH2 506 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 CLIC2O15247 247 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 CREG1O75629 220 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 JTBO76095 146 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 NHLRC4P0CG21 123 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 TFPIP10646 304 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 PDGFRAP16234 1089 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 CASTP20810 708 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 RFC1P35251 1148 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 SLC16A2P36021 539 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 PLA2G5P39877 138 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 PRCPP42785 496 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 MTHFRP42898 656 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 ARSEP51690 589 aa7.38□□□□□ -1.23
GAPVD1-217ENST00000479511 PPP2R2BQ00005 443 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms