RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ZNF273Q14593 569 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 MVPQ14764 893 aaKnown RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 DECR1Q16698 335 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 ZXDCQ2QGD7 858 aaPredicted RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 ZNF284Q2VY69 593 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 ATP13A5Q4VNC0 1218 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 NSUN5P2Q63ZY6 315 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 TMEM211Q6ICI0 200 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 MON1BQ7L1V2 547 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 SHFQ7M4L6 423 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 IQCA1Q86XH1 822 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 NRROSQ86YC3 692 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 AADATQ8N5Z0 425 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 APBB2Q92870 758 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 SPACA9Q96E40 222 aaPredicted RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 LRRC3BQ96PB8 259 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 NEK1Q96PY6 1258 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 THUMPD3Q9BV44 507 aaKnown RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 POLDIP3Q9BY77 421 aaKnown RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 R3HDMLQ9H3Y0 253 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 GOLPH3LQ9H4A5 285 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 NOL11Q9H8H0 719 aaKnown RBP5.13□□□□□ -1.59
UPF3B-203ENST00000478840 FZD3Q9NPG1 666 aa5.13□□□□□ -1.59
UPF3B-203ENST00000478840 A0A087WV48 116 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 A0A0U1RQG5 324 aaPredicted RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CGB1A6NKQ9 187 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 EIF4E1BA6NMX2 242 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 H0YIN7 160 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SLU7O95391 586 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 BAG2O95816 211 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 G6PDP11413 515 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 GJA1P17302 382 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 MPGP29372 298 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 APOBEC1P41238 236 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CDH13P55290 713 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CSNK2A1P68400 391 aaPredicted RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 MAD2L1Q13257 205 aaPredicted RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 FHL2Q14192 279 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 EIF2S3LQ2VIR3 472 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 DCST1Q5T197 706 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 STRIP1Q5VSL9 837 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 DCAF12L2Q5VW00 463 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SLC18B1Q6NT16 456 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CAVIN1Q6NZI2 390 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 TEX38Q6PEX7 206 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 FAM198BQ6UWH4 519 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 IRF2BP2Q7Z5L9 587 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 FOXRED2Q8IWF2 684 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 BEST3Q8N1M1 668 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SLC38A9Q8NBW4 561 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CAMKVQ8NCB2 501 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 CSNK2A3Q8NEV1 391 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 INPP5DQ92835 1189 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 TAAR8Q969N4 342 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 ERO1AQ96HE7 468 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 GRAMD2BQ96HH9 432 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SLC22A12Q96S37 553 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 DDOQ99489 341 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 TRMOQ9BU70 441 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 ABHD6Q9BV23 337 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 QTRT1Q9BXR0 403 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 MRPL9Q9BYD2 267 aaKnown RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 FAM129AQ9BZQ8 928 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SPRY4Q9C004 299 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SEBOXQ9HB31 216 aaPredicted RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 SIRT3Q9NTG7 399 aaPredicted RBP5.12□□□□□ -1.59
UPF3B-203ENST00000478840 PCDHGA5Q9Y5G8 931 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 RPGRIP1LQ68CZ1 1315 aa5.12□□□□□ -1.59
UPF3B-203ENST00000478840 KDM4EB2RXH2 506 aaPredicted RBP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 MS4A18H0YCH9 400 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 J3KR12 359 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 NDUFS4O43181 175 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 HSPA12AO43301 675 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 PRAMEF11O60813 436 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 TOMM70O94826 608 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 EPN2O95208 641 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ZWINTO95229 277 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 VNN2O95498 520 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 EGFP01133 1207 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ARSBP15848 533 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 PFKFB1P16118 471 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ACHEP22303 614 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 UGT1A1P22309 533 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ARHGAP25P42331 645 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 MATR3P43243 847 aaKnown RBP eCLIP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ALDH7A1P49419 539 aaKnown RBP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 LIMK1P53667 647 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 P2RX3P56373 397 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 PPIGQ13427 754 aaKnown RBP eCLIP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 KRT33BQ14525 404 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 PTPRCAPQ14761 206 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 EFNB3Q15768 340 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 ASIC2Q16515 512 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 SYT16Q17RD7 645 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 FAM98BQ52LJ0 330 aaKnown RBP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 MPP7Q5T2T1 576 aa5.11□□□□□ -1.59
UPF3B-203ENST00000478840 FAM109BQ6ICB4 259 aaPredicted RBP5.11□□□□□ -1.59
UPF3B-203ENST00000478840 PLBD1Q6P4A8 553 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms