RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CACNB4O00305 520 aaPredicted RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 TTC4O95801 387 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 GOT2P00505 430 aaKnown RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 WNT1P04628 370 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 MYCLP1P12525 358 aaPredicted RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 ARNTP27540 789 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 PMLP29590 882 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 KIAA1024LP59773 190 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 CACNG1Q06432 222 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 NFATC2Q13469 925 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 NFATC4Q14934 902 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 ERCC6LQ2NKX8 1250 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 SPANXN3Q5MJ09 141 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 UNC5AQ6ZN44 842 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 Q6ZSR6 202 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 SNX20Q7Z614 316 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 TMEM135Q86UB9 458 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 IQCHQ86VS3 1027 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 CCNJLQ8IV13 435 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 SLC22A18ASQ8N1D0 253 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 GLYATL1Q969I3 302 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEC13-215ENST00000477547 FUBP1Q96AE4 644 aaKnown RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 KLHDC7BQ96G42 594 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 FCRL3Q96P31 734 aaPredicted RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 VPS35Q96QK1 796 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 APOOQ9BUR5 198 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 ASB8Q9H765 288 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 GPR27Q9NS67 375 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 SMOXQ9NWM0 555 aa15.2■□□□□ 0.02
SEC13-215ENST00000477547 CNOT1A5YKK6 2376 aaKnown RBP15.2■□□□□ 0.02
SEC13-215ENST00000477547 ZCWPW2A0A1B0GU75 182 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 TOR1BO14657 336 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 VILLO15195 856 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 VAPBO95292 243 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 FOXN2P32314 431 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 TRIM23P36406 574 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 CSNK1EP49674 416 aaKnown RBP15.19■□□□□ 0.02
SEC13-215ENST00000477547 C21orf59P57076 290 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 YPEL5P62699 121 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 OVGP1Q12889 678 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 CBLBQ13191 982 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 PDE1CQ14123 709 aaPredicted RBP15.19■□□□□ 0.02
SEC13-215ENST00000477547 CCDC6Q16204 474 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 CSRP2Q16527 193 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 STEAP4Q687X5 459 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 DOK6Q6PKX4 331 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 MACC1Q6ZN28 852 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 CAPN12Q6ZSI9 719 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 GDAP1Q8TB36 358 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 ZNF398Q8TD17 642 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 DTX3LQ8TDB6 740 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 SKA1Q96BD8 255 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 ULK4Q96C45 1275 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 HIC2Q96JB3 615 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 C9orf72Q96LT7 481 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 TEX101Q9BY14 249 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 TSPYL1Q9H0U9 437 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 FAM96AQ9H5X1 160 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 CATSPERZQ9NTU4 200 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 FAM208BQ5VWN6 2430 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 KNL1Q8NG31 2342 aa15.19■□□□□ 0.02
SEC13-215ENST00000477547 A0A1B0GVT2 93 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A9O60656 530 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 MAGEC1O60732 1142 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 LRP3O75074 770 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 PRSS56P0CW18 603 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 MYBL2P10244 700 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A6P19224 532 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A1P22309 533 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A4P22310 534 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 KELP23276 732 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 HTR1BP28222 390 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 AKT1P31749 480 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A3P35503 534 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 UGT1A5P35504 534 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 MAGEA4P43358 317 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 VSNL1P62760 191 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 GPR33Q49SQ1 333 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 FASTKD1Q53R41 847 aaKnown RBP15.18■□□□□ 0.02
SEC13-215ENST00000477547 TRIM61Q5EBN2 209 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 AARS2Q5JTZ9 985 aaKnown RBP15.18■□□□□ 0.02
SEC13-215ENST00000477547 TPRG1LQ5T0D9 272 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 GPRC6AQ5T6X5 926 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 PSAPL1Q6NUJ1 521 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 NXPE1Q8N323 547 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
SEC13-215ENST00000477547 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 OR4L1Q8NH43 312 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 CEP76Q8TAP6 659 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 GSDMBQ8TAX9 411 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 BTN2A2Q8WVV5 523 aa15.18■□□□□ 0.02
SEC13-215ENST00000477547 CERS2Q96G23 380 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms