RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	RDH12	Q96NR8	316 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ASB2	Q96Q27	587 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	MTMR9	Q96QG7	549 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	SECISBP2	Q96T21	854 aa	Known RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PAFAH2	Q99487	392 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	APOL4	Q9BPW4	351 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	SENP7	Q9BQF6	1050 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	DCUN1D5	Q9BTE7	237 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	NUP85	Q9BW27	656 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZNF717	Q9BY31	904 aa	Predicted RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	SLC13A1	Q9BZW2	595 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	DNAI2	Q9GZS0	605 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZHX3	Q9H4I2	956 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	POLR1B	Q9H9Y6	1135 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	TRIM39	Q9HCM9	518 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	MRPL47	Q9HD33	250 aa	Known RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	NMRK2	Q9NPI5	230 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZC4H2	Q9NQZ6	224 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	AASDHPPT	Q9NRN7	309 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	GIMAP4	Q9NUV9	329 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	DCAF16	Q9NXF7	216 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	B3GNT2	Q9NY97	397 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	MRPL39	Q9NYK5	338 aa	Known RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	GGA3	Q9NZ52	723 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	EMC3	Q9P0I2	261 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	GCNT4	Q9P109	453 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ARMCX1	Q9P291	453 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PI4KB	Q9UBF8	816 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	HMGXB4	Q9UGU5	601 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PGAP2	Q9UHJ9	254 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	VPS51	Q9UID3	782 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZNF229	Q9UJW7	825 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ACAD8	Q9UKU7	415 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	TCAF1	Q9Y4C2	921 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PCDHGA3	Q9Y5H0	932 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PCDHA8	Q9Y5H6	950 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	MAU2	Q9Y6X3	613 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	COL2A1	P02458	1487 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	PDZK1P1	A8MUH7	402 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520		H7C0C1	242 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ENPP3	O14638	875 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	RAD51B	O15315	384 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	HTRA2	O43464	458 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	GAS7	O60861	476 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	NOS1AP	O75052	506 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	UGT2B11	O75310	529 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	KATNA1	O75449	491 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	B3GALNT1	O75752	331 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	UPK1B	O75841	260 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	EPN2	O95208	641 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TRIM16	O95361	564 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	SERPINE1	P05121	402 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	MYL3	P08590	195 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	FGFR1	P11362	822 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TCN1	P20061	433 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	F8A1	P23610	371 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ADSS	P30520	456 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	UGT2B10	P36537	528 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	BMPR1A	P36894	532 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	EIF2D	P41214	584 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	CASP3	P42574	277 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	RPS5	P46782	204 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	GABRB2	P47870	512 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	HARS2	P49590	506 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZNF135	P52742	658 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	RAB25	P57735	213 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	COPZ1	P61923	177 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	CDKL1	Q00532	357 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TCP10	Q12799	353 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	FSTL1	Q12841	308 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	MERTK	Q12866	999 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	STX5	Q13190	355 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ART3	Q13508	389 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TFDP1	Q14186	410 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TRIM25	Q14258	630 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ANGPT1	Q15389	498 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	SURF1	Q15526	300 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	CALCRL	Q16602	461 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	SLC36A3	Q495N2	470 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	SBK1	Q52WX2	424 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	TEX44	Q53QW1	395 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	FGD3	Q5JSP0	725 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	MROH9	Q5TGP6	573 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	AGAP6	Q5VW22	663 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	GTF2IRD2B	Q6EKJ0	949 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	CREB3L2	Q70SY1	520 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ENOSF1	Q7L5Y1	443 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	LINC00523	Q86TU6	105 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	GTF2IRD2	Q86UP8	949 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	MIB1	Q86YT6	1006 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	LGI2	Q8N0V4	545 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZNF786	Q8N393	782 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	DHRSX	Q8N5I4	330 aa		4.7	□□□□□ -1.66
PTCD3-212	ENST00000477520	SLC25A41	Q8N5S1	370 aa		4.7	□□□□□ -1.66

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