RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PDE1CQ14123 709 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-217ENST00000475693 DBN1Q16643 649 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 PLD6Q8N2A8 252 aaKnown RBP17.96■□□□□ 0.47
ATG4B-217ENST00000475693 FRMD1Q8N878 549 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 OR14C36Q8NHC7 312 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 VPS11Q9H270 941 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 FAM83DQ9H4H8 585 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 LTB4R2Q9NPC1 389 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 SLC17A7Q9P2U7 560 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 LAMA1P25391 3075 aa17.96■□□□□ 0.47
ATG4B-217ENST00000475693 MGRN1O60291 552 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 NDUFS3O75489 264 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 DNTTP04053 509 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 GABRG2P18507 467 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 CSE1LP55060 971 aaKnown RBP17.95■□□□□ 0.46
ATG4B-217ENST00000475693 TIAL1Q01085 375 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATG4B-217ENST00000475693 CACNG1Q06432 222 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 FBXO43Q4G163 708 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 LGSNQ5TDP6 509 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 C16orf46Q6P387 395 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 NAPRTQ6XQN6 538 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 SDCCAG8Q86SQ7 713 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-217ENST00000475693 KCNV2Q8TDN2 545 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 LPGAT1Q92604 370 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 SMC6Q96SB8 1091 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 GPR22Q99680 433 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 CXorf56Q9H5V9 222 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 WNT16Q9UBV4 365 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 BDP1A6H8Y1 2624 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 INPP4BO15327 924 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 ADH1BP00325 375 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 ZNF30P17039 623 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 ITGB6P18564 788 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 MAT2AP31153 395 aaKnown RBP17.95■□□□□ 0.46
ATG4B-217ENST00000475693 IRX4P78413 519 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 TYSND1Q2T9J0 566 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 KHDC1Q4VXA5 237 aaKnown RBP17.95■□□□□ 0.46
ATG4B-217ENST00000475693 BANPQ8N9N5 519 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 ASB2Q96Q27 587 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 HHIPQ96QV1 700 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 PKD2L2Q9NZM6 624 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 CRLS1Q9UJA2 301 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 TRPM6Q9BX84 2022 aa17.95■□□□□ 0.46
ATG4B-217ENST00000475693 LZTS3O60299 673 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 PDGFBP01127 241 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 CHN1P15882 459 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 HECTD2Q5U5R9 776 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 ARMC3Q5W041 872 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 ANO7Q6IWH7 933 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 DET1Q7L5Y6 550 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TRMT11Q7Z4G4 463 aaKnown RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 SNX20Q7Z614 316 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TRIM74Q86UV6 250 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 GJD3Q8N144 294 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 PGBD3Q8N328 593 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 PLA2G15Q8NCC3 412 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 COQ10AQ96MF6 247 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 BIRC8Q96P09 236 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 SRPK1Q96SB4 655 aaKnown RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 EBF1Q9UH73 591 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 MCM8Q9UJA3 840 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 ZFR2Q9UPR6 939 aaKnown RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 GON4LQ3T8J9 2241 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 WNT9AO14904 365 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TYROBPO43914 113 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 C2P06681 752 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 DCNP07585 359 aaKnown RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 ATP5DP30049 168 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 STARD6P59095 220 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 ELP6Q0PNE2 266 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 FGL2Q14314 439 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 SPRED3Q2MJR0 410 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 EOGTQ5NDL2 527 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TMEM207Q6UWW9 146 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 KIAA0408Q6ZU52 694 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 RAPH1Q70E73 1250 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TCP10LQ8TDR4 215 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 AP2M1Q96CW1 435 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 SLC30A3Q99726 388 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 NSRP1Q9H0G5 558 aaKnown RBP17.94■□□□□ 0.46
ATG4B-217ENST00000475693 TBC1D17Q9HA65 648 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 NSMCE4AQ9NXX6 385 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 APPL1Q9UKG1 709 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 SLC12A4Q9UP95 1085 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 MED16Q9Y2X0 877 aa17.94■□□□□ 0.46
ATG4B-217ENST00000475693 NIPSNAP2O75323 286 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 PAK4O96013 591 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-217ENST00000475693 ITGALP20701 1170 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 OGNP20774 298 aaKnown RBP17.93■□□□□ 0.46
ATG4B-217ENST00000475693 ACSL1P33121 698 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 B4GALNT1Q00973 533 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 PRKCQQ04759 706 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 CTSL3PQ5NE16 218 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 TAOK1Q7L7X3 1001 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 GDAP1Q8TB36 358 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 CXorf40AQ8TE69 158 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 MYOCQ99972 504 aa17.93■□□□□ 0.46
ATG4B-217ENST00000475693 PAIP2Q9BPZ3 127 aaKnown RBP17.93■□□□□ 0.46
ATG4B-217ENST00000475693 TSR3Q9UJK0 312 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms