RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EVI5LQ96CN4 794 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 SEPT5Q99719 369 aaPredicted RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 POLR3CQ9BUI4 534 aaPredicted RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 MAGIXQ9H6Y5 334 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 COPG2Q9UBF2 871 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 STK39Q9UEW8 545 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 DLGAP4Q9Y2H0 992 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 R3HDM2Q9Y2K5 976 aaKnown RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 FAM90A26D6RGX4 464 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 ANKRD28O15084 1053 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 EPB41L2O43491 1005 aaKnown RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 TBX18O95935 607 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 FAM106CPP0CH98 169 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 UGT1A1P22309 533 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 PAX3P23760 479 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 PIK3CAP42336 1068 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 CLDN20P56880 219 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 MRPS34P82930 218 aaKnown RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 TFAP4Q01664 338 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 MED22Q15528 200 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 KRTAP24-1Q3LI83 254 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 SEPT14Q6ZU15 432 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 RNF168Q8IYW5 571 aaPredicted RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 PDILTQ8N807 584 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 OR1J2Q8NGS2 313 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 UCMAQ8WVF2 138 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 PDZD7Q9H5P4 517 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 ZNF334Q9HCZ1 680 aaPredicted RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 OLA1Q9NTK5 396 aaKnown RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 TAAR2Q9P1P5 351 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 ORC3Q9UBD5 711 aaPredicted RBP6.16□□□□□ -1.42
SMC5-203ENST00000475540 ADAM18Q9Y3Q7 739 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 CLIC4Q9Y696 253 aa6.16□□□□□ -1.42
SMC5-203ENST00000475540 RUSC2Q8N2Y8 1516 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 HCRTR2O43614 444 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 SOCS5O75159 536 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 DAB1O75553 588 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 CHMP24386 653 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 MARK3P27448 753 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 HOXA1P49639 335 aaPredicted RBP6.15□□□□□ -1.42
SMC5-203ENST00000475540 MMP14P50281 582 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 PLIN5Q00G26 463 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 ZNF805Q5CZA5 627 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 OR7E24Q6IFN5 339 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 PAPD4Q6PIY7 484 aaKnown RBP6.15□□□□□ -1.42
SMC5-203ENST00000475540 C19orf48Q6RUI8 117 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 ZNF852Q6ZMS4 543 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 UTP15Q8TED0 518 aaKnown RBP6.15□□□□□ -1.42
SMC5-203ENST00000475540 SLC38A5Q8WUX1 472 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 ZNF583Q96ND8 569 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 LRMDAQ9H2I8 198 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 TCP11L1Q9NUJ3 509 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 MDFICQ9P1T7 246 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 AASSQ9UDR5 926 aa6.15□□□□□ -1.42
SMC5-203ENST00000475540 TDRD9Q8NDG6 1382 aaKnown RBP6.15□□□□□ -1.43
SMC5-203ENST00000475540 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 KANSL1LA0AUZ9 987 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 EIF4E1BA6NMX2 242 aaKnown RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 ATP2A1O14983 1001 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 RNASEH2AO75792 299 aaKnown RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 MBD4O95243 580 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 DDX58O95786 925 aaKnown RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 CDH2P19022 906 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 CD53P19397 219 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 MAN1A1P33908 653 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 COG7P83436 770 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 LRMPQ12912 555 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 DMP1Q13316 513 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 SOWAHCQ53LP3 525 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 OTUD3Q5T2D3 398 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 STXBP5Q5T5C0 1151 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 NCEH1Q6PIU2 408 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 GLDNQ6ZMI3 551 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 PLEKHM3Q6ZWE6 761 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 SDCCAG8Q86SQ7 713 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 CIARTQ8N365 385 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 OR8K5Q8NH50 307 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 HM13Q8TCT9 377 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 POMGNT1Q8WZA1 660 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 ZKSCAN4Q969J2 545 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 NCAPGQ9BPX3 1015 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 TMEM39BQ9GZU3 492 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 FAM118AQ9NWS6 357 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 POLG2Q9UHN1 485 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 FBXW11Q9UKB1 542 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 FAF1Q9UNN5 650 aaPredicted RBP6.14□□□□□ -1.43
SMC5-203ENST00000475540 MTMR6Q9Y217 621 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 PIAS3Q9Y6X2 628 aa6.14□□□□□ -1.43
SMC5-203ENST00000475540 ZCWPW2A0A1B0GU75 182 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 PRR23AA6NEV1 266 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 SCAMP1O15126 338 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 CD4P01730 458 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 TCEA1P23193 301 aaKnown RBP6.13□□□□□ -1.43
SMC5-203ENST00000475540 GALCP54803 685 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 TAS2R40P59535 323 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 GAGE5Q13069 117 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 GAGE6Q13070 117 aa6.13□□□□□ -1.43
SMC5-203ENST00000475540 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms